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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00494 - SQS_PSY)
Squalene/phytoene synthase
(Pfam reference: accession no. PF00494)
(Interpro reference: accession no. IPR002060)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
15 sequences @ 329 aa
(ave. pairwise identity: 0.28)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 10.65)
nucleotides
(available for above)
14 sequences @ 987 bp
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 7.10)
amino acids, restricted set
(corresp. to available nt seqs)
14 sequences @ 329 aa
(ave. pairwise identity: 0.28)
New Hampshire format
(total tree length: 10.10)