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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00493 phylogeny
for amino acid alignment


 
((((((((Q9U446_ENTHI/523-861,((Q96275_ARATH/41-383,(Q8SS42_ENCCU/362-688,((MCM2_SCHPO/471-810,MCM2_YEAST/480-846),Q871F1_NEUCR/476-832))),((MCM2_DROME/445-780,Q9BI22_DUGJA/443-793),Q9XXI9_CAEEL/435-777))),((Q9ZPT4_ARATH/300-581,Q8SRK9_ENCCU/211-526),(Q9SF37_ARATH/336-678,(MCM8_MOUSE/44-404,Q8SQX1_ENCCU/273-608)))),((((MCM3_ENTHI/167-531,(((Q9U1E0_LEIMA/317-646,(PROL_ARATH/313-638,(CDC47_YEAST/397-725,(Q7Q6K1_ANOGA/318-640,O16297_CAEEL/328-652)))),Q7RJM3_PLAYO/402-752),Q7R0H3_GIALA/302-626)),(Q7R0J9_GIALA/381-716,(Q8SSE5_ENCCU/304-622,(((MCM4_DROME/447-772,O42589_XENLA/440-765),Q95XQ8_CAEEL/404-730),(((CDC54_YEAST/505-834,MCM4_SCHPO/480-811),Q7SHS5_NEUCR/580-912),(Q86IF1_DICDI/469-792,Q8RYQ2_ORYSA/440-767)))))),(((Q8H1A3_PEA/330-651,((((MCM6_RAT/19-343,Q960E3_DROME/56-380),MCM6_CAEEL/333-660),Q86B14_DICDI/407-731),(MCM6_YEAST/512-836,MCM6_SCHPO/413-737))),(Q8SRX5_ENCCU/300-624,Q7QZN0_GIALA/424-793)),(Q7YY63_CRYPV/268-626,Q8IDF0_PLAF7/423-751))),(Q7QSR9_GIALA/322-652,((Q9U3X1_ENTHI/197-522,((MCM5_SCHPO/309-642,(MCM5_YEAST/353-689,Q8X0Y2_NEUCR/309-641)),(Q9VGW6_DROME/315-648,MCM5_CAEEL/317-673))),(Q8SRS4_ENCCU/268-615,Q8I5T4_PLAF7/352-678))))),((((Q8TJF6_METAC/263-611,Q8PVX1_METMA/263-609),O29733_ARCFU/151-494),O27798_METTH/256-576),(Q8ZY88_PYRAE/266-590,(Q9YFR1_AERPE/280-607,Q975E0_SULTO/138-460)))),Q979U9_THEVO/274-612),(Q8TWR7_METKA/251-570,Q8TWB5_METKA/192-488)),Y363_METJA/339-669),Y1489_METJA/271-595,Y3513_METJA/258-581);
((((((((Q9U446_ENTHI/523-861:0.34210,((Q96275_ARATH/41-383:0.25266,(Q8SS42_ENCCU/362-688:0.33471,((MCM2_SCHPO/471-810:0.16222,MCM2_YEAST/480-846:0.15700):0.05907,Q871F1_NEUCR/476-832:0.19680):0.06456):0.11974):0.05795,((MCM2_DROME/445-780:0.18412,Q9BI22_DUGJA/443-793:0.31004):0.04521,Q9XXI9_CAEEL/435-777:0.22495):0.07058):0.13917):0.16710,((Q9ZPT4_ARATH/300-581:0.95149,Q8SRK9_ENCCU/211-526:0.65740):0.25580,(Q9SF37_ARATH/336-678:0.34546,(MCM8_MOUSE/44-404:0.25538,Q8SQX1_ENCCU/273-608:0.69137):0.09401):0.24802):0.15066):0.11612,((((MCM3_ENTHI/167-531:0.63733,(((Q9U1E0_LEIMA/317-646:0.46030,(PROL_ARATH/313-638:0.27856,(CDC47_YEAST/397-725:0.28578,(Q7Q6K1_ANOGA/318-640:0.15643,O16297_CAEEL/328-652:0.29973):0.14930):0.06748):0.08618):0.04355,Q7RJM3_PLAYO/402-752:0.41728):0.04623,Q7R0H3_GIALA/302-626:0.71577):0.11601):0.06858,(Q7R0J9_GIALA/381-716:0.54600,(Q8SSE5_ENCCU/304-622:0.32294,(((MCM4_DROME/447-772:0.15221,O42589_XENLA/440-765:0.13534):0.07845,Q95XQ8_CAEEL/404-730:0.23490):0.16887,(((CDC54_YEAST/505-834:0.14829,MCM4_SCHPO/480-811:0.14140):0.04213,Q7SHS5_NEUCR/580-912:0.11530):0.15005,(Q86IF1_DICDI/469-792:0.19061,Q8RYQ2_ORYSA/440-767:0.22375):0.08543):0.06941):0.07373):0.07852):0.15151):0.05933,(((Q8H1A3_PEA/330-651:0.42210,((((MCM6_RAT/19-343:0.11318,Q960E3_DROME/56-380:0.15520):0.06303,MCM6_CAEEL/333-660:0.21783):0.16948,Q86B14_DICDI/407-731:0.28153):0.05529,(MCM6_YEAST/512-836:0.12869,MCM6_SCHPO/413-737:0.15791):0.15480):0.05799):0.04895,(Q8SRX5_ENCCU/300-624:0.36569,Q7QZN0_GIALA/424-793:0.60561):0.06205):0.11567,(Q7YY63_CRYPV/268-626:0.30257,Q8IDF0_PLAF7/423-751:0.36951):0.16253):0.23452):0.06816,(Q7QSR9_GIALA/322-652:0.50871,((Q9U3X1_ENTHI/197-522:0.42179,((MCM5_SCHPO/309-642:0.13513,(MCM5_YEAST/353-689:0.12086,Q8X0Y2_NEUCR/309-641:0.12805):0.03471):0.10109,(Q9VGW6_DROME/315-648:0.16012,MCM5_CAEEL/317-673:0.26287):0.15596):0.04191):0.04570,(Q8SRS4_ENCCU/268-615:0.22240,Q8I5T4_PLAF7/352-678:0.43014):0.07069):0.11630):0.18719):0.04037):0.05419,((((Q8TJF6_METAC/263-611:0.38372,Q8PVX1_METMA/263-609:0.22675):0.13994,O29733_ARCFU/151-494:0.28948):0.06590,O27798_METTH/256-576:0.23722):0.10225,(Q8ZY88_PYRAE/266-590:0.30980,(Q9YFR1_AERPE/280-607:0.28949,Q975E0_SULTO/138-460:0.21816):0.06688):0.10254):0.07489):0.07652,Q979U9_THEVO/274-612:0.38902):0.11018,(Q8TWR7_METKA/251-570:0.34468,Q8TWB5_METKA/192-488:0.66180):0.30589):0.27499,Y363_METJA/339-669:0.52075):0.19317,Y1489_METJA/271-595:0.20917,Y3513_METJA/258-581:0.87235);