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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00486 - Trans_reg_C)
Transcriptional regulatory protein, C terminal
(Pfam reference: accession no. PF00486)
(Interpro reference: accession no. IPR001867)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
377 sequences @ 119 aa
(ave. pairwise identity: 0.32)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 186.44)
nucleotides
(available for above)
373 sequences @ 357 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 138.72)
amino acids, restricted set
(corresp. to available nt seqs)
373 sequences @ 119 aa
(ave. pairwise identity: 0.32)
New Hampshire format
(total tree length: 184.50)