EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00481 - PP2C)
Protein phosphatase 2C
(Pfam reference: accession no. PF00481)
(Interpro reference: accession no. IPR001932)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
36 sequences @ 383 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 33.26)
nucleotides
(available for above)
35 sequences @ 1149 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 21.27)
amino acids, restricted set
(corresp. to available nt seqs)
35 sequences @ 383 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 31.86)