EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00472 alignment
(35 sequences with 140 aa)


RF1_MYCGE/209-322 pqLEEVEITINPSDLRIDTYRASGAGGQHVNRTESAVRI---..-.-THLPTGIVVAC...QEGKSQFSNRD..KAMKMLRAKLWENAQNKQLSTQADLRKSQVG-----.-----SGERAEKIRTYNYPQNR-.ITDHR
RF1_MYCCA/210-323 peMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVRI---..-.-THLPTGIVVTS...QDGRSQHDNKD..IAMTMLRAKVYEAEVEKQQAQADATRKNAVG-----.-----TGARSEKFRTYNYPQNR-.VTDHR
RF1_BORBU/207-320 pnIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVRI---..-.-THLPTGIVVQC...QNERSQHKNKD..QAMKILRARLYEFEDSKKQEQRSSNRKQQVG-----.-----SGDRSERIRTYNFPQNR-.ITDHR
RF1_RICPR/206-319 peAEGIDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRI---..-.-THIPTGITVAL...QDEKSQHKNKA..KALKILRARLYEEKRRQKEQERSDSRRGQVG-----.-----SGDRSERIRTYNFPQGR-.VSDHR
RF1_TREPA/206-319 peMEETEVDIRAEDVRVDVMRASGPGGQCVNTTDSAVRL---..-.-THLPTGIVVVC...QDEKSQIKNKA..KAMRVLRSRVYDLEESKRQVARARERKSQVG-----.-----SGDRSERIRTYNFPQNR-.VTDHR
RF1_BACSU/206-319 peAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRL---..-.-THLPTGVVVSC...QDEKSQIKNKE..KAMKVLRARIYDKFQQEAQAEYDQTRKSAVG-----.-----SGDRSERIRTYNFPQNR-.VTDHR
RF1_HELPY/206-318 peVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRI---..-.-THLPTNISVSM...QDEKSQHKNKD..KALKILKARLYEKQIEEQQLANAKDRKEQVG-----.-----SGDRSERIRTYNYPQNR-.LSEH-
Q46286_CLOPE/8-121 peVDDVEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRI---..-.-THLPSGLVVSC...QDEKSQLKNKE..KAMKVLRARLFEQAEAERLAGIAEDRKSQVG-----.-----TGDRSERIRTYNYPQGR-.VTDHR
RF1_AQUAE/210-323 peVDETDIKIKPEELKIETFRASGAGGQYVNTTETAVRI---..-.-THIPTGIVVQC...QDERSQFQNKQ..KALKILYAKLKDYYERKKQEEIAKERKEQVG-----.-----TGERSEKIRTYNFPQNR-.VTDHR
RF1_CHLTR/208-321 paEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRI---..-.-THIPSGVVVTC...QDERSQHKNKA..KAMRVLKARIRDAEVQKRAQEASAMRSAQVG-----.-----SGDRSERIRTYNFPQNR-.VTDHR
RF1_HAEIN/209-322 elPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRI---..-.-THIPTGIVVEC...QDERSQHKNKA..KAMSVLASRIVQAEQERQAAEQTDMRRNLLG-----.-----SGDRSDKIRTYNYPQGR-.VTDHR
RF1_ECOLI/208-321 elPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRI---..-.-THLPTGIVVEC...QDERSQHKNKA..KALSVLGARIHAAEMAKRQQAEASTRRNLLG-----.-----SGDRSDRNRTYNFPQGR-.VTDHR
RF1_COXBU/210-323 evDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI---..-.-THLPTGVVVEC...QDERSQHKNKA..RAMSLLQSKLLAAERAKQDQEQAAKRKSLVG-----.-----SGDRSERIRTYNFPQGR-.VTDHR
O80723_ARATH/242-355 pqADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRI---..-.-IHLPTGMMVSI...QDERSQHMNRA..KALKVLCARLYEIERLRIQSSRSKLRSDQIG-----.-----SGDRSGRIRTYNFPQGR-.VTDHR
RF1_MYCLE/213-326 epEEIGEVHIDESDLRIDVYRSSGKGGQGVNTTDSAVRI---..-.-THLPTGVVVTC...QNERSQLQNKT..RALQVLAARLQAMAEEQALANASADRASQIR-----.-----TVDRSERIRTYNFPENR-.ITDHR
RF1M_HUMAN/286-399 pqPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRL---..-.-VHIPTGLVVEC...QQERSQIKNKE..IAFRVLRARLYQQIIEKDKRQQQSARKLQVG-----.-----TRAQSERIRTYNFTQDR-.VSDHR
RF1M_SCHPO/245-356 ..NDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRL---..-.-THIPTGITVSM...QDSRSQHQNKE..KAFLVLNSRLAALNAAKENEAERLKRKNQVT-----.-----SSDRSEKLRTYNFNQNR-.VTDHR
RF1M_KLULA/244-354 .dAYERTFKP--DEIRIDVMRASGKGGQHVNTTDSAVRL---..-.-THYPSGIVISM...QEERSQHRNKA..KAFAILRARLAEKERLEKEEKERNARKDQVS-----.-----TTDRSDKIRTYNYPQNR-.ITDHR
RF1_THETH/204-316 .kAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRV---..-.-VHLPTGIMVTC...QDSRSQIKNRE..KALMILRSRLLEMKRAEEAERLRKTRLAQIG-----.-----TGERSEKIRTYNFPQSR-.VTDHR
RF1_SYNY3/212-325 peVDDVEVKIDPKDIEMSTARSGGAGGQNVNKVETAVDL---..-.-FHKPTGIRIFC...TEERSQLQNRE..RAMQILRAKLYDMMLQEQNDAISSNRRSQVG-----.-----TGSRSEKIRTYNYKDNR-.VTDHR
RF2_MYCLE/229-341 vvEITDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVRL---..-.-THVPTGLVVTC...QNEKSQLQNKV..SAMRVLQAKLLERKRLEERAELDALKGRGG------.------SSWGNQIRSYVLHPYQM.VKDLR
RF2_STRCO/224-336 vvEQTDHIEIDESELRVDVYRSSGPGGQGVNTTDSAVRL---..-.-THIPTGIVVSC...QNERSQIQNKA..TAMNVLQAKLLERRRQEEQAKMDALKGDGGN-----.-------SWGNQMRSYVLHPYQM.VKDLR
RF2_BACSU/224-337 efNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRI---..-.-THLPTNVVVTC...QTERSQIKNRE..RAMKMLKAKLYQRRIEEQQAELDEIRGEQKE-----.------IGWGSQIRSYVFHPYSM.VKDHR
RF2_TREPA/218-331 vlDDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSAVRI---..-.-THLPTGIVVTC...QNERSQISNRA..TALSLLRARLYAYERQKKQQEHQRFASEKKD-----.------ISWGNQIRSYVFHPYTM.VKDHR
RF2_CHLTR/224-337 eiDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRI---..-.-THFPTGIVVSC...QNERSQIQNRE..ACMNMLRARIYQKLLQERLEKQNIDRKNKKE-----.------ISWGSQIRNYVFQPYTL.VKDVR
RF2_RICPR/223-336 eiDDDIAITIEDKDLRIDTFRSSGAGGQHVNTTDSAVRI---..-.-THIPTNTVTQC...QSDRSQHKNKA..QAMKMLQAKLYKLEMQKRNENVDKQNANKTD-----.------NSWGHQIRSYVLQPYQI.VKDLR
RF2_ECOLI/225-337 evDDDIDIEINPADLRIDVYRTSGAGGQHVNRTESAVRI---..-.-THIPTGIVTQC...QNDRSQHKNKD..QAMKQMKAKLYELEMQKKNAEKQAMEDNKSD-----.------IGWGSQIRSYVLDDSR-.IKDLR
RF2_HELPY/224-335 elDDDIDIEIDEKDVRYDYYRSSGAGGQHVNKTESAVRI---..-.-THFPTGIVVQC...QNDRSQHKNKA..SALKMLKSKLYELELEKQQS--SAKNEEKSE-----.------IGWGHQIRSYVLAPYQQ.VKDAR
RF2_AQUAE/223-336 qiDEDIKIEIKPEDLKIETFRASGAGGQYVNKTDTAVRI---..-.-THIPTGITVSC...QQERSQYQNKR..KALELLKAKLYQLEMKKLEEKKKQYEGEKTD-----.------IGWGHQIRSYVFHPYKL.IKDLR
RF1M_CAEEL/232-345 pePEEVSVVVPSDSVKIEAMRASGPGGQNVNKRSTAVRM---..-.-THKETGIAVHC...MDERFQHLNIQ..IAYKRLAAILMQKQVDAMLEKIVSKRKLQVG-----.-----SKARAEKIRTYNFQHDR-.VTDHR
RFH_ECOLI/35-141 ..-FTADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRA---..-.-THLASGISVKV...QSERSQHANKR..LARLLIAWKLEQQQQENSAALKSQRRMFHHQ-----.------IERGNPRRTFTGMAFI-.--EG-
ICT1_HUMAN/63-194 ngAKQADSDIPLDRLTISYCRSSGPGGQNVNKVNSKAEVR--..-.-FHLATAEWIAEpvrQKIAITHKNKInrLGELILTSESSRYQFRNLADCLQKIRDMITEASQTP.KEPTKEDVKLHRIRIENMNRERLrQKRIH
YAEJ_ECOLI/1-132 miVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFD..IrASSLPEYYKERL...LAASHHLISSD..GVIVIKAQEYRSQELNREAALARLVAMIKEL-TTEKkARRPTRPTRASKERRLASKAQKSsVKAMR
O66115_ZYMMO/3-134 kyFITQRISIDSDSIEEYFIRASGPGGQNVNKVSSAVELRFD..MaISGLPELVINRL...QEIAASRINNK..GILVIQAQRFRDQPLNRQDAFERLVELIRSATFIPK.KRKPTKATYASKQRRLDGKSKRSmVKSHA
YOL4_YEAST/56-189 .vGALNVTGLPLNQFILRYDRASGPGGQNVNKVNSKCTLTLSglSnCAWIPQEVRNIL...SSGRFRYYAKG.sDSIVIQSDETRSRETNKLKCFEKLVQEIRQTCQFPN.DTTAETSKKWNKIKEKANKERLLdKKVHS