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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00472 phylogeny
for amino acid alignment


 
(((((((((((((RF1_THETH/204-316,(RF1M_KLULA/244-354,RF1M_SCHPO/245-356)),RF1_AQUAE/210-323),((RF1M_CAEEL/232-345,RF1M_HUMAN/286-399),RF1_SYNY3/212-325)),((Q46286_CLOPE/8-121,RF1_HELPY/206-318),(RF1_BACSU/206-319,RF1_TREPA/206-319))),(RF1_BORBU/207-320,RF1_MYCLE/213-326)),((O80723_ARATH/242-355,RF1_RICPR/206-319),((RF1_COXBU/210-323,(RF1_ECOLI/208-321,RF1_HAEIN/209-322)),RF1_CHLTR/208-321))),(RF1_MYCCA/210-323,RF1_MYCGE/209-322)),((RF2_BORBU/216-329,((RF2_SYNY3/227-340,RF2_AQUAE/223-336),((RF2_HELPY/224-335,RF2_RICPR/223-336),RF2_ECOLI/225-337))),(RF2_CHLTR/224-337,(((RF2_STRCO/224-336,RF2_MYCLE/229-341),RF2_BACSU/224-337),RF2_TREPA/218-331)))),RFH_ECOLI/35-141),ICT1_HUMAN/63-194),YOL4_YEAST/56-189),O66115_ZYMMO/3-134),YAEJ_ECOLI/1-132,YAEJ_PSEPU/1-132);
(((((((((((((RF1_THETH/204-316:0.27921,(RF1M_KLULA/244-354:0.22084,RF1M_SCHPO/245-356:0.39793):0.10639):0.15798,RF1_AQUAE/210-323:0.24538):0.05798,((RF1M_CAEEL/232-345:0.61460,RF1M_HUMAN/286-399:0.24099):0.12488,RF1_SYNY3/212-325:0.46380):0.08749):0.04657,((Q46286_CLOPE/8-121:0.15050,RF1_HELPY/206-318:0.24260):0.05431,(RF1_BACSU/206-319:0.18127,RF1_TREPA/206-319:0.18443):0.11238):0.06273):0.06927,(RF1_BORBU/207-320:0.11582,RF1_MYCLE/213-326:0.39023):0.06145):0.04491,((O80723_ARATH/242-355:0.32749,RF1_RICPR/206-319:0.19060):0.11016,((RF1_COXBU/210-323:0.18097,(RF1_ECOLI/208-321:0.12406,RF1_HAEIN/209-322:0.15149):0.09235):0.11326,RF1_CHLTR/208-321:0.20197):0.04593):0.03124):0.02241,(RF1_MYCCA/210-323:0.19905,RF1_MYCGE/209-322:0.25052):0.07793):0.23856,((RF2_BORBU/216-329:0.25107,((RF2_SYNY3/227-340:0.67412,RF2_AQUAE/223-336:0.11015):0.23254,((RF2_HELPY/224-335:0.22269,RF2_RICPR/223-336:0.21298):0.06796,RF2_ECOLI/225-337:0.18722):0.04009):0.09059):0.08802,(RF2_CHLTR/224-337:0.27665,(((RF2_STRCO/224-336:0.10006,RF2_MYCLE/229-341:0.15003):0.37467,RF2_BACSU/224-337:0.18973):0.09186,RF2_TREPA/218-331:0.25006):0.07497):0.06595):0.08080):0.38866,RFH_ECOLI/35-141:0.68160):0.44459,ICT1_HUMAN/63-194:1.21522):0.57616,YOL4_YEAST/56-189:1.15344):0.57778,O66115_ZYMMO/3-134:0.30907):0.34585,YAEJ_ECOLI/1-132:0.33931,YAEJ_PSEPU/1-132:0.15146);