EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00472 - RF-1)
Peptidyl-tRNA hydrolase domain
(Pfam reference: accession no. PF00472)
(Interpro reference: accession no. IPR000352)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
38 sequences @ 140 aa
(ave. pairwise identity: 0.43)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 17.08)
nucleotides
(available for above)
35 sequences @ 420 bp
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 14.93)
amino acids, restricted set
(corresp. to available nt seqs)
35 sequences @ 140 aa
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 16.08)