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Protein and Associated NucleotideDomains with Inferred Trees

PF00443 phylogeny
for nucleotide alignment


 
(((Q9S9J3_ARATH/799-1104,Q9S9K0_ARATH/810-1197),(Q9S9J6_ARATH/27-294,((Q94301_CAEEL/90-360,(((UBP10_MOUSE/406-786,UBP11_CANFA/87-409),UBPW_MOUSE/48-345),((O74442_SCHPO/122-426,((((((UBP14_YEAST/342-800,UBP13_HUMAN/333-858),(UBPA_DICDI/316-832,P91502_CAEEL/316-785)),(O01467_CAEEL/142-512,(Q8IU19_CAEEL/211-819,O76364_CAEEL/33-529))),(((UBP5_YEAST/443-801,UBP4_YEAST/559-920),((UBP8_HUMAN/774-1106,(((Q19132_CAEEL/420-1067,UBP6_HUMAN/529-1366),UBP2_MOUSE/12-344),(UBP4_MOUSE/299-919,O22207_ARATH/314-913))),(UBP12_SCHPO/308-974,UBP12_YEAST/361-1107))),UBP4_SCHPO/69-415)),(((((UBPY_CAEEL/196-790,((((UBP15_YEAST/202-533,UBP5_SCHPO/210-525),(UBP7_HUMAN/211-518,O45623_CAEEL/190-500)),UBPE_DROME/52-435),(O01049_CAEEL/271-684,(FAFX_HUMAN/1547-1946,FAF_DROME/1665-2059)))),(UBP2_KLULA/695-1199,UBP2_YEAST/733-1255)),(UBP11_YEAST/295-704,UBP7_YEAST/606-1066)),(O44787_CAEEL/253-583,(((UBP14_CAEEL/99-455,(UBP14_RABIT/101-478,UBP6_SCHPO/97-461)),UBP6_YEAST/106-494),Q84426_CHVP1/3-278))),((UBP37_HUMAN/338-948,Q8C0R0_MOUSE/338-948),((UBP9_YEAST/131-664,UBP13_YEAST/137-665),(O24455_ARATH/20-359,(UBP12_HUMAN/21-351,UBPX_CAEEL/24-400)))))),((UBP3_YEAST/457-908,((UBP8_YEAST/134-465,UBP8_SCHPO/142-432),UBP1_YEAST/98-735)),(UBP10_YEAST/359-730,UBP16_YEAST/50-494)))),O49688_ARATH/560-860))),O77283_DROME/973-1623))),Q9ZUW4_ARATH/115-342,Q9FH47_ARATH/802-1105);
(((Q9S9J3_ARATH/799-1104:0.07516,Q9S9K0_ARATH/810-1197:0.09681):0.02237,(Q9S9J6_ARATH/27-294:0.31956,((Q94301_CAEEL/90-360:0.62499,(((UBP10_MOUSE/406-786:0.48950,UBP11_CANFA/87-409:0.77266):0.26771,UBPW_MOUSE/48-345:0.38407):0.16342,((O74442_SCHPO/122-426:0.48235,((((((UBP14_YEAST/342-800:0.63555,UBP13_HUMAN/333-858:0.36489):0.16194,(UBPA_DICDI/316-832:0.49312,P91502_CAEEL/316-785:0.49293):0.08393):0.13332,(O01467_CAEEL/142-512:0.34482,(Q8IU19_CAEEL/211-819:0.11396,O76364_CAEEL/33-529:0.17077):0.33184):0.47015):0.23992,(((UBP5_YEAST/443-801:0.28748,UBP4_YEAST/559-920:0.24590):0.36350,((UBP8_HUMAN/774-1106:0.37370,(((Q19132_CAEEL/420-1067:0.35585,UBP6_HUMAN/529-1366:0.34735):0.06229,UBP2_MOUSE/12-344:0.48237):0.06675,(UBP4_MOUSE/299-919:0.24061,O22207_ARATH/314-913:0.35258):0.05018):0.08737):0.13032,(UBP12_SCHPO/308-974:0.31373,UBP12_YEAST/361-1107:0.31703):0.05695):0.11358):0.07829,UBP4_SCHPO/69-415:0.57666):0.09026):0.10084,(((((UBPY_CAEEL/196-790:0.82537,((((UBP15_YEAST/202-533:0.29102,UBP5_SCHPO/210-525:0.28877):0.09924,(UBP7_HUMAN/211-518:0.24801,O45623_CAEEL/190-500:0.35671):0.08978):0.14109,UBPE_DROME/52-435:0.52529):0.26403,(O01049_CAEEL/271-684:0.68083,(FAFX_HUMAN/1547-1946:0.21802,FAF_DROME/1665-2059:0.33075):0.15168):0.18311):0.10726):0.07142,(UBP2_KLULA/695-1199:0.25444,UBP2_YEAST/733-1255:0.38229):0.51350):0.15934,(UBP11_YEAST/295-704:0.26799,UBP7_YEAST/606-1066:0.22786):0.45820):0.03814,(O44787_CAEEL/253-583:0.76569,(((UBP14_CAEEL/99-455:0.65794,(UBP14_RABIT/101-478:0.37274,UBP6_SCHPO/97-461:0.37288):0.16783):0.11059,UBP6_YEAST/106-494:0.50813):0.20686,Q84426_CHVP1/3-278:0.86254):0.06501):0.08655):0.02505,((UBP37_HUMAN/338-948:0.02652,Q8C0R0_MOUSE/338-948:0.08139):0.64064,((UBP9_YEAST/131-664:0.25509,UBP13_YEAST/137-665:0.24119):0.33762,(O24455_ARATH/20-359:0.31886,(UBP12_HUMAN/21-351:0.17821,UBPX_CAEEL/24-400:0.34421):0.12845):0.12305):0.15667):0.14437):0.09274):0.16356,((UBP3_YEAST/457-908:0.72111,((UBP8_YEAST/134-465:0.41982,UBP8_SCHPO/142-432:0.50031):0.14782,UBP1_YEAST/98-735:0.72042):0.04714):0.09953,(UBP10_YEAST/359-730:0.48053,UBP16_YEAST/50-494:0.68533):0.21681):0.00002):0.24163):0.08414,O49688_ARATH/560-860:0.50401):0.08433):0.02642):0.27010,O77283_DROME/973-1623:1.35037):0.38447):0.41667):0.04372,Q9ZUW4_ARATH/115-342:0.07706,Q9FH47_ARATH/802-1105:0.11616);