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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00436 phylogeny
for amino acid alignment


 
(((((PRIB_PASMU/9-107,PRIB_VIBCH/2-97),((((((((SSB_CAMJE/2-104,SSB_HELPJ/2-105),SSB_SYNY3/3-103),((Q9KKD0_BORHE/4-107,SSB_BORBU/4-107),SSB_TREPA/4-105)),SSB_AQUAE/2-104),((P73145_SYNY3/1-99,O83332_TREPA/22-122),(Q9X552_CORGL/1-105,((SSB2_STRCO/4-109,SSB_MYCSM/4-109),SSB1_STRCO/1-106)))),(((((SSB_UREPA/1-98,(SSB_MYCPN/1-102,SSB_MYCGE/1-98)),SSB_THETH/128-226),(SSB_THEAQ/5-107,SSB_THETH/5-107)),(SSB_THEMA/4-107,SSB_MYCPU/1-100)),((((Q99SG1_STAAM/2-101,O54492_STACA/2-102),((((P94590_BACSU/2-103,((Q9F1I4_ENTFA/1-102,Q9CIG8_LACLA/1-102),((Q9CFP4_LACLA/2-103,Q9FDF5_STRPY/2-103),((Q9QUF5_9ZZZZ/1-102,Q60056_9BACT/2-103),Q9F1G6_ENTFA/2-103)))),((O80084_9CAUD/2-103,Q99WL1_STAAM/2-103),SSB_BACHD/2-103)),(Q9B0G2_9CAUD/1-101,Q38144_BPSPP/1-103)),(SSB1_CLOAB/1-103,SSB3_CLOAB/1-102))),(Q07715_STAAU/2-94,Q9ZNM6_9MOLU/2-99)),(Q02327_9ZZZZ/3-105,P71177_ENTAE/3-104)))),(((((((SSB_BPP1/6-113,SSB2_SALTI/6-113),O82908_ECO57/6-112),((SSB_RHILO/5-114,((SSB_RICPR/5-114,SSB_RHIME/5-114),SSB_CAUCR/5-114)),SSB_VIBCH/6-114)),SSB_BUCAI/6-113),((Q9PCW1_XYLFA/5-108,SSB1_XYLFA/4-108),SSB_PSEAE/4-111)),((SSB_NEIMB/3-106,SSB_SHEHA/6-110),Q9F278_ACTAC/4-108)),((Q9EZL8_CYTJO/5-109,O32777_9LACT/6-110),((Q9LII1_ARATH/80-197,SSB_ARATH/71-176),((SSB_MOUSE/30-138,SSB_DROME/38-141),(((O14087_SCHPO/25-124,RIM1_YEAST/19-116),O74715_CANPA/18-118),YNA1_CAEEL/54-159)))))),Q97GI5_CLOAB/106-204)),(Q75H70_ORYSA/56-158,Q9SX99_ARATH/56-154)),Q8RZB8_ORYSA/83-178),O49428_ARATH/99-194,Q8GWJ4_ARATH/82-177);
(((((PRIB_PASMU/9-107:0.38739,PRIB_VIBCH/2-97:0.46201):1.00530,((((((((SSB_CAMJE/2-104:0.30271,SSB_HELPJ/2-105:0.39674):0.24510,SSB_SYNY3/3-103:0.66677):0.08143,((Q9KKD0_BORHE/4-107:0.34356,SSB_BORBU/4-107:0.12558):0.41946,SSB_TREPA/4-105:0.37402):0.18825):0.09757,SSB_AQUAE/2-104:0.54322):0.00000,((P73145_SYNY3/1-99:1.02868,O83332_TREPA/22-122:1.01669):0.24514,(Q9X552_CORGL/1-105:1.17589,((SSB2_STRCO/4-109:0.13148,SSB_MYCSM/4-109:0.15703):0.29346,SSB1_STRCO/1-106:0.81520):0.17615):0.32615):0.18205):0.19813,(((((SSB_UREPA/1-98:0.48032,(SSB_MYCPN/1-102:0.11650,SSB_MYCGE/1-98:0.32235):0.69666):0.14115,SSB_THETH/128-226:0.70634):0.07651,(SSB_THEAQ/5-107:0.05866,SSB_THETH/5-107:0.24568):0.93758):0.10411,(SSB_THEMA/4-107:0.59559,SSB_MYCPU/1-100:0.89908):0.13309):0.02869,((((Q99SG1_STAAM/2-101:0.33060,O54492_STACA/2-102:0.12415):0.73935,((((P94590_BACSU/2-103:0.35743,((Q9F1I4_ENTFA/1-102:0.55121,Q9CIG8_LACLA/1-102:0.45695):0.20087,((Q9CFP4_LACLA/2-103:0.15320,Q9FDF5_STRPY/2-103:0.10714):0.03697,((Q9QUF5_9ZZZZ/1-102:0.38549,Q60056_9BACT/2-103:0.15385):0.10489,Q9F1G6_ENTFA/2-103:0.12166):0.06264):0.04152):0.10679):0.00000,((O80084_9CAUD/2-103:0.16448,Q99WL1_STAAM/2-103:0.07262):0.10349,SSB_BACHD/2-103:0.08938):0.11648):0.01860,(Q9B0G2_9CAUD/1-101:0.35384,Q38144_BPSPP/1-103:0.33166):0.39632):0.09023,(SSB1_CLOAB/1-103:0.43250,SSB3_CLOAB/1-102:0.18040):0.07764):0.06863):0.09518,(Q07715_STAAU/2-94:0.65110,Q9ZNM6_9MOLU/2-99:0.62109):0.36124):0.06566,(Q02327_9ZZZZ/3-105:0.20729,P71177_ENTAE/3-104:0.18375):0.71555):0.03870):0.01907):0.04791,(((((((SSB_BPP1/6-113:0.14580,SSB2_SALTI/6-113:0.12573):0.04457,O82908_ECO57/6-112:0.20859):0.05958,((SSB_RHILO/5-114:0.09657,((SSB_RICPR/5-114:0.32749,SSB_RHIME/5-114:0.10255):0.10752,SSB_CAUCR/5-114:0.12206):0.04300):0.27931,SSB_VIBCH/6-114:0.04494):0.08026):0.06032,SSB_BUCAI/6-113:0.09295):0.06633,((Q9PCW1_XYLFA/5-108:0.37860,SSB1_XYLFA/4-108:0.37853):0.12745,SSB_PSEAE/4-111:0.10543):0.03959):0.06643,((SSB_NEIMB/3-106:0.34337,SSB_SHEHA/6-110:0.12617):0.04544,Q9F278_ACTAC/4-108:0.28457):0.04231):0.14555,((Q9EZL8_CYTJO/5-109:0.57845,O32777_9LACT/6-110:1.74080):0.17452,((Q9LII1_ARATH/80-197:0.52383,SSB_ARATH/71-176:0.60757):0.86654,((SSB_MOUSE/30-138:0.53154,SSB_DROME/38-141:0.48080):0.20393,(((O14087_SCHPO/25-124:1.01121,RIM1_YEAST/19-116:0.57547):0.14510,O74715_CANPA/18-118:0.93837):0.56296,YNA1_CAEEL/54-159:0.77530):0.11079):0.18157):0.19712):0.00000):0.23345):0.49179,Q97GI5_CLOAB/106-204:0.94696):0.36641):0.50117,(Q75H70_ORYSA/56-158:0.68871,Q9SX99_ARATH/56-154:0.64097):0.23954):0.29305,Q8RZB8_ORYSA/83-178:0.56798):0.29013,O49428_ARATH/99-194:0.08061,Q8GWJ4_ARATH/82-177:0.15352);