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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00416 alignment
(13 sequences with 132 aa)


RT13_PROWI/3-109 YIQNTHLNDKKQ--IYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQIITQN----------------------YDTGSDVRRFTRQNIQR.LVNIHSYRGYRHIQGLPVRGQRSHGNART
RT13_MARPO/3-109 YILGTNLNSNKQ--VKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKIISQN----------------------YLVDSELKRVIQRDIKR.LISIGCYRGFRHNAGLPLRGQRTHTNAKT
RS13_ECOLI/2-107 RIAGINIPDHKH--AVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-----------------------FVVEGDLRREISMSIKR.LMDLGCYRGLRHRRGLPVRGQRTKTNART
RS13_MYCBO/3-109 RLVGVDLPRDKR--MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEAN----------------------LKVEGDLRREVQADIRR.KIEIGCYQGLRHRRGMPVRGQRTKTNART
RR13_ARATH/49-153 RVGGVEIPANKR--IEYSLQYIHGIGRTRARQILVDLQMEN-KITKDMAEEELIILRDEVSK-----------------------YMIEGDLRRFNALAIKR.LKEIQCYRGVRHIQGLPCRGQRTKNNCRT
RS13_MYCSP/3-106 RVLNIEIPNNKK--ARISLTYIFGIGPTIAKQILADANVDGEKRVKELTEEELTRIRDEAKK-----------------------YTTEGDLKREINLNIKR.LMEIKSYRVIRHRKDTCKR--STKKNART
RS18_YEAST/16-144 RLLNTNVDGNIK--IVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLER.LKKIRAHRGIRHFWGLRVRGQHTKTTGRR
RS18_RAT/14-142 RVLNTNIDGRRK--IAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLER.LKKIRAHRGLRHFWGLRVRGQHTKTTGRR
RS18_ARATH/14-142 RVLNTNVDGKQK--IMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLER.LKKIRNHRGLRHYWGLRVRGQHTKTTGRR
RS18_DROME/14-142 RIMNTNIDGKRK--VGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLER.LKKIRSHRGLRHYWGLRVRGQHTKTTGRR
RS13_HALMA/25-152 RIGQTDLDGTKS--VERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERVEN-FADDVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINR.MKMIDSYRGVRHKRGQKVRGQRTKSTGRT
RS13_SULAC/11-140 RLFGQDVDGTMK--LPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLLNNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFLQLEMILRgRGRSRSWRGVRHSLGLKVRGQRTRTTGRT
RT13_ACACA/5-110 QNFNTFVSDNKNKNIFSALKDIHGVNLKKINKMGLVMGLDKFEKVSSMNFELFSLIKKQAIF-------------------------FYNLEENKIFNNVNK.KKKIKNYTGMRHILKLPVRGQRTHTNAKT