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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF00405 - Transferrin)
Transferrin
(
Pfam
reference: accession no.
PF00405
)
(
Interpro
reference: accession no.
IPR001156
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
10 sequences @ 350 aa
(ave. pairwise identity: 0.57)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.52)
nucleotides
(available for above)
8 sequences @ 1050 bp
(ave. pairwise identity: 0.62)
New Hampshire format
(total tree length: 2.16)
amino acids, restricted set
(corresp. to available nt seqs)
8 sequences @ 350 aa
(ave. pairwise identity: 0.57)
New Hampshire format
(total tree length: 2.84)