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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00393 phylogeny
for amino acid alignment


 
(((((((((Q8UF73_AGRT5/180-470,(Q98GH7_RHILO/180-470,Q8FXG6_BRUSU/180-469)),Q8EFR5_SHEON/206-499),Q8TA04_TRIVA/158-442),(((Q83G38_TROWT/177-468,Q6ADQ1_LEIXX/183-473),((Q826E4_STRAW/181-471,(O32911_MYCLE/189-478,Q6NHC5_CORDI/183-476)),Q8G729_BIFLO/181-475)),Q6A799_PROAC/184-473)),(((((6PGD_CHLTR/180-472,(Q823H8_CHLCV/180-472,6PGD_CHLPN/178-470)),O51509_BORBU/175-464),(Q6LS71_PHOPR/196-486,((Q8TA03_DICDI/183-480,Q6MEF8_PARUW/181-471),(Q8SAQ4_PORYE/75-372,((((Q7SFZ4_NEUCR/212-510,6PGD_CANAL/204-504),6PGD_SCHPO/183-479),6PGD_CUNEL/182-472),((6PGD_SHEEP/179-469,Q7M451_ASCSS/181-470),(6PGD_CERCA/180-468,Q17761_CAEEL/179-471))))))),(6PGD_TREPA/179-475,Q8A8E5_BACTN/188-478)),(((Q6HPK6_BACHK/178-469,(Q8CXN9_OCEIH/178-468,6PGD_STAAS/178-466)),((((6PGD_BUCAI/178-467,((Q7VRX5_CANBF/180-472,Q6UA37_9ENTR/194-483),6PGD_BUCBP/178-467)),O66227_ECOLI/179-467),((Q88WS6_LACPL/182-475,Q836Q9_ENTFA/179-470),Q71ZU4_LISMF/178-468)),(Q893F9_CLOTE/178-468,6PGD_BACSU/177-467))),((Q7NLK6_GLOVI/192-482,((Q8YLM3_ANASP/179-469,6PGD_SYNY3/189-481),6PGD_SYNP7/179-470)),(Q8SAQ5_PORYE/41-338,((Q8SAQ6_CHLRE/182-474,(O22111_SOYBN/184-478,Q7Y248_ORYSA/168-466)),(Q8SAQ8_PHYIN/182-472,Q9SME1_9PHAE/183-473))))))),Q8SRX1_ENCCU/178-458),Q74H97_LACJO/176-459),(Q7VC99_PROMA/179-471,Q7V1T5_PROMP/179-471)),Q6WAT4_TRYCR/180-474,Q6TUM2_LEIME/182-476);
(((((((((Q8UF73_AGRT5/180-470:0.21519,(Q98GH7_RHILO/180-470:0.19058,Q8FXG6_BRUSU/180-469:0.26588):0.07113):0.26876,Q8EFR5_SHEON/206-499:0.42388):0.06414,Q8TA04_TRIVA/158-442:0.52285):0.05235,(((Q83G38_TROWT/177-468:0.45378,Q6ADQ1_LEIXX/183-473:0.24055):0.08871,((Q826E4_STRAW/181-471:0.26804,(O32911_MYCLE/189-478:0.21511,Q6NHC5_CORDI/183-476:0.22151):0.09610):0.07097,Q8G729_BIFLO/181-475:0.30491):0.04306):0.05266,Q6A799_PROAC/184-473:0.43405):0.11307):0.07790,(((((6PGD_CHLTR/180-472:0.27683,(Q823H8_CHLCV/180-472:0.13308,6PGD_CHLPN/178-470:0.23032):0.07837):0.36298,O51509_BORBU/175-464:0.50130):0.06835,(Q6LS71_PHOPR/196-486:0.32239,((Q8TA03_DICDI/183-480:0.33059,Q6MEF8_PARUW/181-471:0.25807):0.03881,(Q8SAQ4_PORYE/75-372:0.25684,((((Q7SFZ4_NEUCR/212-510:0.16278,6PGD_CANAL/204-504:0.18352):0.04310,6PGD_SCHPO/183-479:0.16679):0.08693,6PGD_CUNEL/182-472:0.18753):0.04285,((6PGD_SHEEP/179-469:0.17804,Q7M451_ASCSS/181-470:0.16527):0.04265,(6PGD_CERCA/180-468:0.17428,Q17761_CAEEL/179-471:0.26145):0.05141):0.06138):0.07887):0.03377):0.04109):0.03400):0.04509,(6PGD_TREPA/179-475:0.35949,Q8A8E5_BACTN/188-478:0.33328):0.20630):0.11315,(((Q6HPK6_BACHK/178-469:0.20421,(Q8CXN9_OCEIH/178-468:0.15182,6PGD_STAAS/178-466:0.24560):0.05171):0.04064,((((6PGD_BUCAI/178-467:0.16324,((Q7VRX5_CANBF/180-472:0.39736,Q6UA37_9ENTR/194-483:0.13191):0.06400,6PGD_BUCBP/178-467:0.24863):0.07268):0.15635,O66227_ECOLI/179-467:0.09804):0.08036,((Q88WS6_LACPL/182-475:0.27869,Q836Q9_ENTFA/179-470:0.09942):0.10974,Q71ZU4_LISMF/178-468:0.16280):0.04777):0.05516,(Q893F9_CLOTE/178-468:0.43464,6PGD_BACSU/177-467:0.40397):0.10873):0.02516):0.08136,((Q7NLK6_GLOVI/192-482:0.21590,((Q8YLM3_ANASP/179-469:0.12786,6PGD_SYNY3/189-481:0.20264):0.05562,6PGD_SYNP7/179-470:0.17900):0.10090):0.10045,(Q8SAQ5_PORYE/41-338:0.31368,((Q8SAQ6_CHLRE/182-474:0.25875,(O22111_SOYBN/184-478:0.13935,Q7Y248_ORYSA/168-466:0.18857):0.06482):0.03877,(Q8SAQ8_PHYIN/182-472:0.14347,Q9SME1_9PHAE/183-473:0.23432):0.07698):0.04848):0.17994):0.06302):0.02512):0.06001):0.10508,Q8SRX1_ENCCU/178-458:0.96874):0.07223,Q74H97_LACJO/176-459:0.61519):0.09364,(Q7VC99_PROMA/179-471:0.15226,Q7V1T5_PROMP/179-471:0.22894):0.29220):0.70395,Q6WAT4_TRYCR/180-474:0.20090,Q6TUM2_LEIME/182-476:0.17941);