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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00386 - C1q)
C1q domain
(Pfam reference: accession no. PF00386)
(Interpro reference: accession no. IPR001073)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
51 sequences @ 161 aa
(ave. pairwise identity: 0.31)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 30.03)
nucleotides
(available for above)
49 sequences @ 483 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 20.49)
amino acids, restricted set
(corresp. to available nt seqs)
49 sequences @ 161 aa
(ave. pairwise identity: 0.30)
New Hampshire format
(total tree length: 28.92)