EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00385 - Chromo)
'chromo' (CHRromatin Organisation MOdifier) domain
(Pfam reference: accession no. PF00385)
(Interpro reference: accession no. IPR000953)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
188 sequences @ 89 aa
(ave. pairwise identity: 0.27)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 100.90)
nucleotides
(available for above)
181 sequences @ 267 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 71.50)
amino acids, restricted set
(corresp. to available nt seqs)
181 sequences @ 89 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 97.79)