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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00352 alignment
(56 sequences with 106 aa)


TBP_PLAFA/47-132 niSLNIHNIISSANLCIDINLRLVAVS--.........IRNAEYNPSKINT.LIIRLNKP.......-QCTALIFKNGRIMLTGTRTKKDSIMGCKKIAKIIKIVT
TRF_DROME/46-131 qhEIRLQNIVATFSVNCELDLKAINSR--.........TRNSEYSPKRFRG.VIMRMHSP.......-RCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLG
TBP_ENTHI/52-136 .tHPEIVNVVSTFQLGVKLELRKIVQK--.........ARNAEYNPKRFAG.AIMRISSP.......-KSTALIFQTGKIVCTGTRSIEESKIASKKYAKIIKKIG
TBP_TETTH/48-133 dlYPKLQNIVSTVNLSTKLDLKQIALR--.........ARNAEYNPKRFAA.VIMRLRDP.......-KTTALIFASGKMVCTGAKTEEDSNRAARKYAKIIQKIG
TBP_ACECL/13-98 giIPELQNVVSTVNLGCTLELKEIAMQ--.........ARNAEYNPKRFAA.VIMRIRDP.......-KTTALIFGSGKMVCTGAKSEQDSRTAARKYAKIVQKLG
Q12651_PNECA/51-136 giVPTLQNIVATVNLDCRLDLKTIALH--.........ARNAEYNPKRFAA.VIMRIREP.......-KTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLG
Q9XG30_GUITH/70-155 eiTPNIQNVVSTVSLGIQLDLKRIALK--.........ARNAEYNPRRFAA.VIMRIRDP.......-KTTALIFSSGKMVVTGAKSEDSARVACKKYARIIQRLG
Q8T052_DROME/199-283 elDIVINNVVCSFSVGCHLKLREIALQ--.........GSNVEYRRE--NGmVTMKLRHP.......-YTTASIWSSGRITCTGATSESMAKVAARRYARCLGKLG
TBPL1_HUMAN/8-92 alDILITNVVCVFRTRCHLNLRKIALE--.........GANVIYKRD--VGkVLMKLRKP.......-RITATIWSSGKIICTGATSEEEAKFGARRLARSLQKLG
TBP_PLAFA/138-227 fcNFKIENIIASANCNIPIRLEVLAHDH-.........KEYCNYEPELFAG.LVYRYKPTs.....nLKSVILIFVSGKIIITGCKSVNKLYTVFQDIYNVLIQYK
TBP_ENTHI/141-227 ysNFNVQNIVGSCDVKFQIALRTLVDSY-.........LAFCQYEPEVFPG.LVYRMASP.......-KVTLLVFSTGKVVLTGAKDEESLNLAYKNIYPILLANR
TBP_TETTH/138-224 fkDFKIQNIVGSTDVKFPINLDHLEQDH-.........KKFVQYEPEIFPG.KIYREFNT.......-KIVLLIFVSGKIVLTGAKTRENINKAFQKIYWVLYNYQ
Q9XG30_GUITH/161-247 fiDFRIQNIVASCDVRFPIRLESLAHAH-.........NQFCSYEPELFPG.LIYRMITP.......-KVVLLIFVSGKLVLTGAKQRNDIFQAFSNIYSVLCLYK
TBP_DICDI/112-198 ftDFKIQNIVGSCDVKFPIKLELLHNAH-.........TSFTNYEPEIFPG.LIYKMIQP.......-KVLLLIFVSGKIVLTGAKVREYIYEAFENIYPVLSAFK
Q9U7A4_ANTLO/171-257 faDFKIQNIVSSCDTQFSIRLEGLAFAH-.........SNFCSYEPELFPG.LIYRMVKP.......-KIVLLIFVSGKIVLTGAKMRDEIYEAFDNIYPVLTQYK
TBP_SOLTU/110-196 fkDFKIQNIVGSCDVKFPIRLEGLAYAH-.........GAFSSYEPELFPG.LIYRMKQP.......-KIVLLIFVSGKIVITGAKVRDETYTAFENIYPVLTEFR
TBP_MOUSE/227-313 flDFKIQNMVGSCDVKFPIRLEGLVLTH-.........QQFSSYEPELFPG.LIYRMIKP.......-RIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFR
Q07450_ONCVO/92-178 ftEFKVQNMVGSCDVRFPIQLEGLCLTH-.........TQFSTYEPELFPG.LIYRMVKP.......-RVVLLIFVSGKVVITGAKYKKDIDDAFNQIYPILKGFK
TBP_DROVI/260-346 flDLKIQNMVGLCDVKFPIRLEGLVLTH-.........CNFSRYEPELFPG.LIYRMVRP.......-RIVLLLPAPGKVVLTGAKVRQEIYDAFDKIFSILKKFK
TRF_DROME/136-222 fmEYKLQNIVATVDLRFPIRLENLNHVH-.........GQFSSYEPEMFPG.LIYRMVKP.......-RIVLLIFVNGKVVFTGAKSRKDIMDCLEAISPILLSFR
TBPC_HALN1/94-181 qtGFTVENVVCTAMLDELVSLNALAIGLG.........LEVTEYEPEQFPG.LVYRPEEI.......-GAVLLVFANGKMVITGAKDTETAESAYEYFQSKVQELV
TBP_AERPE/97-182 kpQIQIQNIVASANLKVYIDLEKAALE--.........FENSLYEPEQFPG.LIYRMDEP.......-RVVMLIFSSGKMVITGAKMENEVYDAVKKVARKLKEAD
TBP_PYROC/109-194 rpKVQIQNIVASANLNVCVDLERAALT--.........LENSMYEPEQFPG.LIHRMDEP.......-RVVLLIFSSGKMVITGAKREEEVYEAVNKIYEKLKKLR
TBP_SULSH/100-185 kpKIQIQNIVASANLHVNVNLDKAAFL--.........LENNMYEPEQFPG.LIFRMDDP.......-RVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAELD
TBP_THEVO/95-182 dpDIIVQNIVAVYDLESELNLTDIAMSLG.........LENVEYEPEQFPG.LVYRVEEP.......-RVVLLLFGSGKVVCTGAKEESEIEQAVIKVKKELQKVG
TBPD_HALN1/96-183 spPVHVQNIVCSGSLDQDLNLNAIAIGLG.........LEDVEYEPEQFPG.LVYRLNDP.......-DVVVLLFGSGKLVITGGSNPDDAHHALEIIHERLTDLG
TBPB_HALN1/96-183 npPIEVQNIVSSASLEQSLNLNAIAIGLG.........LEQIEYEPEQFPG.LVYRLDDP.......-DVVVLLFGSGKLVITGGQNPDEAEQALAHVQDRLTELG
TBPE_HALN1/96-183 dpEIVVQNIVTSADLGRQLNLNAIAIGLG.........LENIEYEPEQFPG.LVYRLDDP.......-EVVALLFGSGKLVITGGKEPKDAEHAVDKITSRLEELG
TBP_ARCFU/94-181 epEVKVQNIVASADLGVDLNLNAIAIGLG.........LENIEYEPEQFPG.LVYRLDNP.......-RVVVLIFGSGKMVVTGGKSPEDARKAVERISEELRTLG
TBP_METTH/94-179 efEIKIQNIVASANLGKPLNLEAVALGL-.........-ENTEYEPEQFPG.LVYRLDDP.......-KVVLLLFGSGKVVCTGAKSAEDAKLGVEKTKARLAELD
TBP_METTL/93-177 npEVNVQNMVATADLGIEPNLDDIS---T.........LEGTEYEPEQFPG.LVYRLSDP.......-KVVVLIFGSGKVVITGLKKKDDAYLALDKILSTLKELE
TBP_METJA/96-181 npEIKIQNMVATADLGIEPNLDDIAL--M.........VEGTEYEPEQFPG.LVYRLDDP.......-KVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEVQ
O51971_HALN1/5-90 kdTITIENVVASTAIEQELDLSRVAMD--.........LEGADYDPEQFPG.LVYRLDEP.......-SVVALLFGSGKLVITGGKHPVDAEHAVDTIDSRLEDLG
TBP_PYRWO/97-182 apQIDVQNMVFSGDIGREFNLDVVALTL-.........-PNCEYEPEQFPG.VIYRVKEP.......-KSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKYG
TBPD_HALN1/5-90 tdTIQIENVVASTDLSQELALEQLATD--.........LPGAEYNPGDFPG.VIYRLDDP.......-KSATLIFDSGKAVCTGAQSVDDVHDAISIVVEDLRDLG
TBPF_HALN1/5-90 adTIHIENVVASSDLGQELALDQLATD--.........LDGAEYNPEDFPG.VVYRLQEP.......-KSATLIFRSGKVVCTGAKSVDAVHDALEIVFDDLRELG
TBPE_HALN1/5-90 keTINIENVVASTGIGQELDLQSVAMD--.........LEGADYDPEQFPG.LVYRTQDP.......-KSAALIFRSGKIVCTGAKSTDDVHESLRIVFDKLRELS
TBP_ARCFU/3-88 dyKIKIENVVASTQIGENIDLNKISRE--.........IKDSEYKPKQFPG.LVLRTKEP.......-KAAALVFRSGKVVCTGSKSVEDARRAVKQIVKMLKEIG
TBP_THEAC/4-89 reKITIENIVASTSLAEHLDLSRIALA--.........LDGSEYEPEQFPG.LIYRLQEP.......-KTAVLIFRSGKVNCTGAKNIEDVKRTIKIIIDKLKAAD
TBP_METTL/2-87 epEIKIVNVVVSTQIGTDIDLEYAADI--.........LDNAEYEPEQFPG.LVCRLSDP.......-KVALLIFRSGKLNCTGAKSKEDAEIAIKKIIKELKDAG
TBP_METTH/3-88 dvDIKIENIVASATLGKSIDLQTVAEA--.........LENVDFNREQFPG.LVYKLKEP.......-KTAALIFGSGKLVCTGAKSIEDSKRAIKLTVDMMRTMD
TBP_PYROC/18-103 kpTANIENIVATVSLDQTLDLNLIERS--.........ILTVEYNPEQFPG.LVYRLDSP.......-KVTALIFKSGKMVVTGAKSTRDLIEAVKKIVRNLKKHG
TBP_SULSH/9-94 kpIVNIENIVATVTLEQSLDLYAMERS--.........IPNIEYDPDQFPG.LIFRLEQP.......-KVTALIFKSGKMVVTGAKSTEELIKAVKRIIKTLKKYG
TBP_AERPE/6-91 kpEVKIENIVATVILENQLDLNLIETK--.........IQDVDYNPDQFPG.LVYRLESP.......-RVTVLIFKSGKMVITGAKSINQLIHVVKKLLKAFADQG
TBP_THECE/3-88 nvKLRIENIVASVDLFTQLNLERVIEM--.........CPHSKYNPEEFPG.IICRFDEP.......-KVALLIFSSGKLVVTGAKSVEDIERAVNKLIQMLKKIG
TBPC_HALN1/1-87 .mTVEIANIVGSGDLGVELDVEPLEADLS.........TPYSEYDPSNYHG.LYVRLEEN.......-GPLITVYRSGKYIITGCASMESLHETNEEFLGMLADLG
TBPL1_HUMAN/97-182 ftDFKVVNVLAVCNMPFEIRLPEFTKNN-.........RPHASYEPELHPA.VCYRIKS-.......LRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESR
Q8T052_DROME/288-375 flNFRIVNVLGTCSMPWAIKIVNFSERH-.........RENASYEPELHPG.VTYKMRDP......dPKATLKIFSTGSVTVT-AASVNHVESAIQHIYPLVFDFR
Q9XZP5_BRUMA/139-225 irNYRVCNVLATCKMPFGVKIEELAQKY-.........PDCSQYEPELSVG.LIWRSTN-.......PRATLRIHTTGSITVTGAASESDVMKAVEVIYPIVKEFR
P90869_CAEEL/355-441 irNYRVNNVLATCRLPFGIKIEEVAAKY-.........PSESTYEPELSVG.LVWRSVT-.......PKATLRIHTTGSITVTGAQSEADVLEVLSKIYPIVLEFR
O74068_CERSY/97-181 ctRPVVRNMVATVDAGRTVPIDRISSR--.........IPGAVYDPGSFPG.MILKGLG-.......-SCSFLVFASGKVVIAGARSPGELYRSSFDLLARLNGAG
Q9GNY9_LEIMA/183-287 slKFRVRSIAARFNVCSPIRLDKLAAYQLdpamsigvaKLQVSYEPERFNG.CVLRLVGKssrgdnqWSVSCSVFVTGKVQLMGARSMDELRFAFNAFVPIIAKNL
Q9XZP5_BRUMA/46-130 cfEFQIRNVVCNYTLPLHIDLHRVALN--.........SGNVAFDRG--RGvLLKQKRNP.......-SCYVKIYSSGKIYIVGCRSESECKRAARGVARMVQKTM
P90869_CAEEL/262-346 diDIQIRNVVCNYTLPLHIDLRKLAMN--.........THNVTYERE--KGvMMKQKRSP.......-GCYIKVYSSGKVYIVGCRSEADCKRAARSIARHVQRVM
Q9BIE4_LEIDO/195-279 ..FPVVVAVQAQASIPVGINLAELSCA--.........TRNVEYMPNNRIPpATMRLHEP.......-TAVVMMHNSGALSIIGAASVSEARQAAELAARIIRKAL
Q9VQE8_DROME/174-258 ..RLKTNAVNATFSVPFNLNLRQFHLEN-.........PVVTRYDTSKYPF.LVYKMMGT.......-TVEIAIFPTGYVIVLFATTMEITKLAIAHILPTLYRLK