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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00352 phylogeny
for nucleotide alignment


 
((((((((TBP_SULSH/100-185,TBP_PYROC/109-194),((TBP_PYRWO/97-182,((TBP_METTL/2-87,(TBP_METJA/96-181,TBP_METTL/93-177)),TBP_METTH/94-179)),((((TBP_METTH/3-88,TBP_THEAC/4-89),TBP_ARCFU/3-88),((TBP_SULSH/9-94,TBP_PYROC/18-103),(((O51971_HALN1/5-90,((TBPC_HALN1/1-87,TBPC_HALN1/94-181),(TBPE_HALN1/96-183,(TBPB_HALN1/96-183,TBPD_HALN1/96-183)))),(TBPE_HALN1/5-90,(TBPF_HALN1/5-90,TBPD_HALN1/5-90))),TBP_THECE/3-88))),TBP_ARCFU/94-181))),(((Q9U7A4_ANTLO/171-257,((TBP_MOUSE/227-313,(((TBP_TETTH/138-224,TBP_PLAFA/138-227),((TBP_DICDI/112-198,TBP_ENTHI/141-227),(Q07450_ONCVO/92-178,Q9XG30_GUITH/161-247))),TBP_SOLTU/110-196)),(TBP_DROVI/260-346,TRF_DROME/136-222))),(Q9GNY9_LEIMA/183-287,O74068_CERSY/97-181)),(((Q8T052_DROME/288-375,((P90869_CAEEL/355-441,Q9XZP5_BRUMA/139-225),TBPL1_HUMAN/97-182)),Q9BIE4_LEIDO/195-279),Q9VQE8_DROME/174-258))),TBP_THEVO/95-182),TRF_DROME/46-131),((TBP_ACECL/13-98,(TBP_ENTHI/52-136,(TBP_TETTH/48-133,TBP_PLAFA/47-132))),(Q9XG30_GUITH/70-155,Q12651_PNECA/51-136))),(TBPL1_HUMAN/8-92,Q8T052_DROME/199-283)),P90869_CAEEL/262-346,Q9XZP5_BRUMA/46-130);
((((((((TBP_SULSH/100-185:0.31530,TBP_PYROC/109-194:0.14888):0.15410,((TBP_PYRWO/97-182:0.44993,((TBP_METTL/2-87:0.34427,(TBP_METJA/96-181:0.19409,TBP_METTL/93-177:0.15321):0.12762):0.08443,TBP_METTH/94-179:0.22268):0.05247):0.09455,((((TBP_METTH/3-88:0.38456,TBP_THEAC/4-89:0.27162):0.06571,TBP_ARCFU/3-88:0.26790):0.10128,((TBP_SULSH/9-94:0.39593,TBP_PYROC/18-103:0.12533):0.22599,(((O51971_HALN1/5-90:0.19719,((TBPC_HALN1/1-87:0.58415,TBPC_HALN1/94-181:0.40382):0.12403,(TBPE_HALN1/96-183:0.10363,(TBPB_HALN1/96-183:0.15142,TBPD_HALN1/96-183:0.13253):0.11968):0.04895):0.04576):0.09103,(TBPE_HALN1/5-90:0.20517,(TBPF_HALN1/5-90:0.14562,TBPD_HALN1/5-90:0.17113):0.09812):0.13648):0.01677,TBP_THECE/3-88:0.32109):0.06588):0.05610):0.13891,TBP_ARCFU/94-181:0.20384):0.05955):0.07940):0.07105,(((Q9U7A4_ANTLO/171-257:0.20682,((TBP_MOUSE/227-313:0.11604,(((TBP_TETTH/138-224:0.29464,TBP_PLAFA/138-227:0.41117):0.08864,((TBP_DICDI/112-198:0.16897,TBP_ENTHI/141-227:0.36920):0.07001,(Q07450_ONCVO/92-178:0.28623,Q9XG30_GUITH/161-247:0.23020):0.06452):0.05848):0.05588,TBP_SOLTU/110-196:0.19160):0.08584):0.14683,(TBP_DROVI/260-346:0.22526,TRF_DROME/136-222:0.35214):0.06081):0.04886):0.15924,(Q9GNY9_LEIMA/183-287:0.51168,O74068_CERSY/97-181:0.48921):0.35974):0.07500,(((Q8T052_DROME/288-375:0.25114,((P90869_CAEEL/355-441:0.25997,Q9XZP5_BRUMA/139-225:0.23406):0.24321,TBPL1_HUMAN/97-182:0.34708):0.15095):0.09629,Q9BIE4_LEIDO/195-279:0.83945):0.10917,Q9VQE8_DROME/174-258:0.79520):0.15256):0.14472):0.07580,TBP_THEVO/95-182:0.28395):0.28924,TRF_DROME/46-131:0.34197):0.19073,((TBP_ACECL/13-98:0.20184,(TBP_ENTHI/52-136:0.34564,(TBP_TETTH/48-133:0.06887,TBP_PLAFA/47-132:0.56657):0.09389):0.08892):0.04990,(Q9XG30_GUITH/70-155:0.23613,Q12651_PNECA/51-136:0.18786):0.04461):0.08755):0.13214,(TBPL1_HUMAN/8-92:0.20477,Q8T052_DROME/199-283:0.39821):0.15291):0.48981,P90869_CAEEL/262-346:0.26478,Q9XZP5_BRUMA/46-130:0.19803);