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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00352 phylogeny
for amino acid alignment


 
((((((((((TBP_METTL/2-87,TBP_THECE/3-88),(((((((TBP_TETTH/138-224,TBP_PLAFA/138-227),(Q9XG30_GUITH/161-247,(((TBP_SOLTU/110-196,TBP_DICDI/112-198),(TRF_DROME/136-222,((TBP_DROVI/260-346,Q07450_ONCVO/92-178),TBP_MOUSE/227-313))),Q9U7A4_ANTLO/171-257))),(Q9GNY9_LEIMA/183-287,O74068_CERSY/97-181)),TBP_ENTHI/141-227),((((P90869_CAEEL/355-441,Q9XZP5_BRUMA/139-225),Q9BIE4_LEIDO/195-279),(Q8T052_DROME/288-375,TBPL1_HUMAN/97-182)),Q9VQE8_DROME/174-258)),((TBP_SULSH/100-185,TBP_AERPE/97-182),TBP_PYROC/109-194)),((TBP_PYRWO/97-182,TBP_THEVO/95-182),((((TBPE_HALN1/96-183,((TBPC_HALN1/94-181,(TBPB_HALN1/96-183,TBPD_HALN1/96-183)),O51971_HALN1/5-90)),TBP_ARCFU/94-181),(TBP_METJA/96-181,TBP_METTL/93-177)),TBP_METTH/94-179)))),((TBP_METTH/3-88,TBP_THEAC/4-89),(TBPC_HALN1/1-87,(TBPE_HALN1/5-90,(TBPF_HALN1/5-90,TBPD_HALN1/5-90))))),TBP_ARCFU/3-88),(TBP_AERPE/6-91,(TBP_SULSH/9-94,TBP_PYROC/18-103))),TBP_PLAFA/47-132),(((TBP_ACECL/13-98,(Q12651_PNECA/51-136,Q9XG30_GUITH/70-155)),TBP_TETTH/48-133),TBP_ENTHI/52-136)),TRF_DROME/46-131),(TBPL1_HUMAN/8-92,Q8T052_DROME/199-283)),P90869_CAEEL/262-346,Q9XZP5_BRUMA/46-130);
((((((((((TBP_METTL/2-87:0.35574,TBP_THECE/3-88:0.41521):0.08383,(((((((TBP_TETTH/138-224:0.35440,TBP_PLAFA/138-227:0.48573):0.06261,(Q9XG30_GUITH/161-247:0.17698,(((TBP_SOLTU/110-196:0.10107,TBP_DICDI/112-198:0.22653):0.01942,(TRF_DROME/136-222:0.39840,((TBP_DROVI/260-346:0.22401,Q07450_ONCVO/92-178:0.20856):0.02679,TBP_MOUSE/227-313:0.03813):0.06223):0.08363):0.06087,Q9U7A4_ANTLO/171-257:0.10443):0.07804):0.05056):0.05846,(Q9GNY9_LEIMA/183-287:0.72106,O74068_CERSY/97-181:1.17889):0.51357):0.18497,TBP_ENTHI/141-227:0.39363):0.14067,((((P90869_CAEEL/355-441:0.28642,Q9XZP5_BRUMA/139-225:0.05627):0.12692,Q9BIE4_LEIDO/195-279:1.49881):0.20404,(Q8T052_DROME/288-375:0.27190,TBPL1_HUMAN/97-182:0.45182):0.15480):0.14527,Q9VQE8_DROME/174-258:1.48085):0.33763):0.34796,((TBP_SULSH/100-185:0.18130,TBP_AERPE/97-182:0.18926):0.02369,TBP_PYROC/109-194:0.09131):0.16006):0.21612,((TBP_PYRWO/97-182:0.48917,TBP_THEVO/95-182:0.33929):0.09945,((((TBPE_HALN1/96-183:0.09730,((TBPC_HALN1/94-181:0.64223,(TBPB_HALN1/96-183:0.12325,TBPD_HALN1/96-183:0.16557):0.08529):0.05848,O51971_HALN1/5-90:0.39005):0.06328):0.11382,TBP_ARCFU/94-181:0.17948):0.11074,(TBP_METJA/96-181:0.07417,TBP_METTL/93-177:0.16642):0.20896):0.04860,TBP_METTH/94-179:0.16902):0.06618):0.08177):0.11584):0.05332,((TBP_METTH/3-88:0.37433,TBP_THEAC/4-89:0.27069):0.05052,(TBPC_HALN1/1-87:1.09110,(TBPE_HALN1/5-90:0.18780,(TBPF_HALN1/5-90:0.05287,TBPD_HALN1/5-90:0.20637):0.16223):0.06920):0.18317):0.08471):0.05354,TBP_ARCFU/3-88:0.33170):0.11622,(TBP_AERPE/6-91:0.32858,(TBP_SULSH/9-94:0.20041,TBP_PYROC/18-103:0.14182):0.04540):0.25773):0.30309,TBP_PLAFA/47-132:0.74359):0.20218,(((TBP_ACECL/13-98:0.14207,(Q12651_PNECA/51-136:0.11035,Q9XG30_GUITH/70-155:0.20878):0.06018):0.00891,TBP_TETTH/48-133:0.11970):0.13291,TBP_ENTHI/52-136:0.30477):0.12412):0.05887,TRF_DROME/46-131:0.37556):0.25013,(TBPL1_HUMAN/8-92:0.25584,Q8T052_DROME/199-283:0.25455):0.21122):0.72129,P90869_CAEEL/262-346:0.13366,Q9XZP5_BRUMA/46-130:0.25970);