EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00345 alignment
(20 sequences with 447 bp)


ECPD_ECOLI/26-152 GACATTGTCATTTCGGGTACTCGCGTAATATATAAA...AGCGATCAAAAAAGTGTCAACGTACGTCTGGAAAAT---AAAGGGAATAACCCGTTGCTTGTCCAGAGTTGGTTAGATACTGGCGATGACAACGCTGAGCCTGGCAGTATTACAGTCCCTTTTACTGCTACGCCGCCAGTATCGCGTATTGATGCCAAACGTGGGCAAACAATCAAATTAATGTACACAGCCAGC.........ACCTCACTGCCTAAAGACAGAGAGAGCGTGTTCTGGTTTAACGTACTGGAAGTTCCACCAAAACCAGAT------------GCAGAAAAGGTCGCGAATCAAAGC---.....................---CTGCTGCAACTGGCATTTCGCACA------------CGTATAAAACTTTTCTATCGCCCGGATGGATTGAAG
MRKB_KLEPN/20-146 AATATTATTGTTAACGGTACCCGCTTTATTTATCCA...GGAAATGAAAAAGAAATAACGGTGCAGCTCTCTAAC---ACCGCCGACCGTCCGGCGCTGGCGACAGCCTGGCTGGATAACGGTAATGCCGACGCGACGCCGGATACCATTACGACCCCCTTTATTATCACGCCGCCTATTTCCCGCGTTGATGCGAAAAGCGGTCAAACCCTGCGTATTAAGCTCGGCAGTAAT.........GCAGGGCTGGCTAAAGATAAAGAGACGCTGTGGTGGCTGAACCTTCTGGAAATACCGCCGGTTGAGGCCAGC------------CAGAAAAACGAAGGGCAAAAT---.....................---ATTCTGCAGCTGGCGATTCGTTCG------------CGCTTTAAGTTTATTTATCGCCCTGCCGGGCTAGGC
HIFB1_HAEIN/29-156 AATGTGATTATCACTGGCACCAGAGTGATTTATCCC...GCTGGGCAAAAAAATGTTATTGTGAAGTTAGAAAACAATGATGATTCG---GCAGCCTTGGTGCAAGCCTGGATTGATAATGGCAATCCAAATGCCGATCCAAAATACACCAAAACCCCTTTTGTGATTACGCCGCCTGTTGCTCGAGTGGAAGCAAAATCAGGGCAAAGTTTGCGGATTACGTTCACAGGCGGC.........GAGCCTTTACCTGACGATCGTGAAAGCCTCTTTTATTTTAATTTGTTAGATATACCGCCGAAACCCGATGCG------GAATTTCTGGCAAAACACGGCAGTTTT---.....................------ATGCAAATTGCTATTCGTTCA------------CGTTTGAAGTTGTTTTATCGCCCTGCGAAACTTTCG
FIMB_BORPE/28-155 AGCCTCGTCATCACGGGTACGCGCGTGATCTACAAC...GCGGGCTCGCCCGAGACCACGGTGAAGATGAGCAAC---GAGGGGCAGGCCCCCGCGCTGATGCAGGCATGGATCGATGACGGCAATGCCGAGGCGAAGCCGGACGAAGTCCAGGTGCCGTTCTTCCTGACGCCTCCGCTGGCGCGGGTGGACCCGGGCAAGGGGCAGACCTTGCGCATTTTCTTCAATGGCTACccggatggcAAGACGCTGCCGTCCGACCGCGAATCGGTCTTCTGGCTGAACGTTCTCGAAGTGCCGCCCAAGGCGACGCCC------------------GAGGAAGGCCACGGG---.....................---GTCCTGCAGCTGACCATCCGCTCG------------CGCCTGAAGCTGTTCTATCGGCCCAAGGGCCTGTCC
YEHC_ECOLI/34-157 GGAATTGTTATCTACGGGACGCGCATTATTTACCCG...GCAGAAAATAAAGAAGTGATGGTGCAGTTGATGAAC---CAGGGAAACCGTTCTTCGCTGCTGCAGGCGTGGATTGATGATGGCGATACGTCATTACCACCAGAAAAAATTCAGGTTCCTTTCATGTTAACGCCACCAGTGGCAAAAATAGGGGCAAATTCCGGGCAGCAAGTAAAAATCAAAATTATGCCG---.........AATAAACTGCCCACTAATAAAGAAAGCATTTTTTATCTGAATGTTCTGGATATTCCACCAAATAGT------------------CCAGAGCAAGAAGGTAAGAAT---.....................---GCACTGAAGTTTGCGATGCAAAAC------------AGAATTAAGTTGTTTTACCGGCCAGCGGGTATTGCT
YRAI_ECOLI/25-145 GGAATCGTTTTACAGCGAACGCGAGTGATCTATGAT...GCCAGCCGCAAAGAGGCTGCGTTACCTGTCGCAAACAAAGGCGCAGAAACGCCTTATTTACTGCAATCATGGGTAGATAAT---------------ATAGATGGTAAAAGCCGTGCCCCATTTATTATAACCCCACCGCTATTTCGTCTTGAGGCTGGCGATGACTCATCACTGCGAATTATTAAAACAGCT---.........GATAACCTGCCTGAAAATAAAGAGTCGCTGTTCTACATTAATGTTCGTGCCATTCCAGCAAAGAAA---------------AAATCAGATGATGTTAATGCTAAC---.....................---GAGTTGACGCTGGTATTTAAAACA------------CGGATCAAAATGTTTTATCGCCCCGCACACCTGAAG
LPFB_SALTY/25-144 GGCGTGGCATTAAGCAGCACGCGTGTTATTTATGAC...GGTAGTAGAAAGGAAGCTTCTCTTACGGTAAATAATAAAAGCACCACGGATGAATTTCTCATTCAGTCATGGATTGATGAT---------------GCTAACGGTAATAAAAAGACGCCCTTTATCATCACTCCACCGTTATTTAAATTAAGCCCGACTAAAAATAACGTTTTACGTATTGTTAATACGACG---.........AACACGTTACCGCAGGATCGCGAGTCCGTTTATTGGATTAACGTAAAAGCTATTCCTGCCAAAAGTGAAGAC------------------GCGGAAGCTAAAAAC---.....................---GTACTGCAGATCGCCGTACGTACC------------CGCTTAAAACTGTTCTATCGCCCGGCGGGCCTGAAA
FIMC_SALTY/26-146 GGGATTGCATTAGGCGCCACGCGCGTTATTTATCCC...TCGGCGGCGAAGCAGACTTCTCTGGCAATCAGTAATAGCGATACTCAAGAACGTTACCTCGTCAATTCATGGATCGAAAAT---------------AACGCTGGGCAGAAAGAAAAAACGTTTATCGTTACGCCGCCTTTATTCGTCAGCGAGCCCAAAAGTGAAAACACGCTGCGTATTATCTACGCCGGG---.........CAACCGCTACCCGGGGATCGGGAGTCGTTATTCTGGATGAACGTGAAAGCCATCCCGTCGGTCGAT---------------AAAAGTCATATTGAAGGAAAAAAC---.....................---GTTCTGCAACTGGCGATTCTGTCG------------CGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCG
FIMC_ECOLI/37-157 GGAGTGGCCTTAGGTGCGACTCGCGTAATTTATCCG...GCAGGGCAAAAACAAGAGCAACTTGCCGTGACAAATAATGATGAAAATAGTACCTATTTAATTCAATCATGGGTGGAAAAT---------------GCCGATGGTGTAAAGGATGGTCGTTTTATCGTGACGCCTCCTCTGTTTGCGATGAAGGGAAAAAAAGAGAATACCTTACGTATTCTTGATGCAACAAAT.........AACCAATTGCCACAGGACCGGGAAAGTTTATTCTGGATGAACGTTAAAGCGATTCCGTCAATGGAT---------------AAATCAAAATTG---ACTGAGAAT---.....................---ACGCTACAGCTCGCAATTATCAGC------------CGCATTAAACTGTACTATCGCCCGGCTAAATTAGCG
PAPD_ECOLI/22-142 GCTGTTTCGCTGGACAGAACCCGCGCGGTGTTTGAC...GGGAGTGAGAAGTCAATGACGCTTGATATCTCCAATGATAACAAACAACTGCCCTATCTTGCTCAGGCATGGATAGAAAAT---------GAAAATCAGGAAAAAATTATTACAGGGCCGGTTATTGCCACCCCTCCGGTTCAGCGCCTTGAGCCGGGTGCGAAAAGCATGGTCAGGCTGAGTACCACACCGGAT......atcAGTAAACTTCCTCAGGACAGGGAATCACTGTTTTATTTTAATCTCAGGGAAATACCGCCGAGG------------------------AGTGAAAAGGCCAATGTA---.....................------CTGCAGATAGCCTTACAGACC------------AAAATAAAGCTTTTTTATCGCCCGGCAGCAATTAAA
FANE_ECOLI/20-137 GCTTTTACTCTCAATAGTACGCGGTATATATATAAT...GAAGGACAGCAAAGTGTATCTGTTAACATCCATAAC---GAAAGTGAACATAAATATGGTGGTCAGGTATGGATTGATAAT------------ATAGACAAGAATGGAGAGGTCGTATTTTTTTCTCCAAGTCCAATGGTGTTCAAATTGAACCCGAAACAGAAGCAAATAGTTCGCATTGTTAATATTAAT---.........GATAATTTACCTAAAGACAGAGAATCGATTTTCTGGCTTAATGTTCAGGAGATCCCTCCAGCTCCA---------------------AAGGGAGATGGGGGTAGT---.....................------CTGTCACTGGCAATTAATAAT------------CGAGTAAAATTAATATATCGACCAATTGCTCTAAAA
CLPE_ECOLI/35-151 TCCCTAGCGGCAGATCAGACCCGCTATATCTTTCGA...GGGGACAAGGATGCGCTGACCATCACGGTCACCAACAATGACAAGGAGCGTACCTTTGGTGGTCAGGCCTGGGTGGACAAT------------ATCGTGGAGAAGGACACCCGTCCGACTTTTGTGGTGACACCGTCCTTCTTCAAGGTGAAGCCGAATGGTCAGCAGACACTGCGTATCATCATGGCCTCG---.........GACCATCTGCCGAAGGATAAAGAGTCGGTGTACTGGCTGAACCTGCAGGATATTCCGCCG---------------------------GCTCTGGAGGGCAGCGGT---.....................------ATTGCAGTGGCCGTGCGCACG------------AAGCTGAAACTGTTCTATCGCCCGAAGGCACTGATT
SEFB_SALEN/41-166 GGCCTAAGATTGGGCACTACACGTGTTATTTATAAA...GAAGATGCTCCATCAACAAGTTTTTGGATTATGAAT---GAAAAAGAATATCCAATCCTTGTTCAAACTCAAGTATATAAT---------------GATGATAAATCATCAAAAGCTCCATTTATTGTAACACCACCTATTTTGAAAGTTGAAAGTAATGCGCGAACAAGATTGAAGGTAATACCAACAAGT---.........AATCTATTCAATAAAAATGAGGAGTCTTTGTATTGGTTGTGTGTAAAAGGAGTCCCACCACTAAATGAT------------AATGAAAGCAATAATAAAAACAAC---.....................ATAACTACGAATCTTAATGTGAATGTGGTTACGAATAGTTGTATTAAATTAATTTATAGGCCTAAAACTATAGAC
PSAB_YERPS/44-174 ACTGTAAAAATAGGGACGACGCGGGTCATTTACCCTtcgTCTTCGACAAAAGGGGTATCCGTATCGGTGGCTAAT---CCACAGGATTATCCAATATTGGTACAAACCCAAGTTAAAGAT---------------GAAGATAAGACGTCGCCCGCTCCTTTTATTGTTACCCCTCCTTTATTCAGGCTTGATGCTGGGTTACAAGGCCGTGTACGTATTATTCGGACCGGT---.........GGAAAATTCCCTGAAGATCGTGAAACACTGCAATGGTTGTGCCTAACGGGGATCCCACCTAAGAACGGTGATGCTTGGGGTAATACGCAAAATAATCCAAAAAAT---.....................TCATCCCCAACTATGGATATTCAAATGTCTATCAGTACCTGCATAAAATTATTATTCAGACCCGATAAAGTTAAA
MYFB_YEREN/43-175 TCAGTGAGGACTGGTGAGACACGGATTATCTATCCAttaTCTTCAGTTAAAGGAGTGTCATTATCAGTAACCAAT---CCACAAGATTATCCGATATTGGTACAAACTCAGGTCAAAGGT---------------GAAGATAAACATTCGCCAGCGCCTTTTATGGCGACTCCGCCATTATTTCGCCTGGATGCGGGTATGCGGGGGCGAGTACGCGTAACTCGCACTGGT---.........GGTAACTTCCCCGAGGATCGCGAAAGTTTGCAATGGTTATGTATAACGGGTGTACCACCTAAAGAGGGGGATGTATGGGATAATAGCCAACACGATAAAAAAAACAAT..................atgCAAGATGTTAATCTAAATATCCTGTTATCAGTTGGTACTTGTATGAAGCTACTGGTCAGGCCCGATCAACTTAGA
CAF1M_YERPE/36-171 GGCGTGACTATAGGTGAGAGTAGGATCATATACCCG...TTAGATGCTGCTGGCGTTATGGTCTCGGTGAAAAAC---ACCCAAGATTATCCGGTTCTCATTCAGTCTAGGATCTACGAC---------GAGAATAAAGAAAAAGAATCAGAGGATCCTTTCGTGGTCACTCCGCCATTGTTTCGATTGGATGCTAAGCAACAAAATTCTTTGCGTATAGCTCAGGCTGGA---.........GGTGTTTTCCCGCGAGATAAAGAGAGCCTAAAGTGGTTATGCGTAAAAGGGATTCCACCAAAGGATGAAGATATATGGGTTGATGATGCGACAAATAAGCAAAAATTCaatccagacaaagatgtgggaGTGTTCGTGCAATTCGCAATTAATAAT------------TGCATTAAGCTTTTGGTTCGACCGAATGAATTAAAA
NFAE_ECOLI/49-179 TCGCTGCATCTGGGGGCCACCCGGGTGGTGTACAAC...CCGGCCTCGTCGGGGGAGACGCTGACTGTGATTAAT---GACCAGGACTATCCGATGCTGGTGCAGTCGGAGGTGCTGAGT---------------GAGGACCAGAAGAGTCCGGCGCCTTTTTGGTGGACACCACCGTTGTTCCGTCGTGATGGTCAGCAGTCGAGTCGTCGTCGTAGTGTCAGTACGGGC---.........GGGGAGTTTCCGTCAGACCGTGAGAGTCGGCAGTGGATTTGCGTGAAAGGCATTCCGCCGAAGGAGGATGACAGGTGGGCGGAAGGGAAGGACGGGGAGAAGAAGGCT.....................GACAAAGTCTCCCTGAATGTACAGCTTTCAGTGAGCAGCTGCATCAAGCTGTTTGTTCGTCCGCCGGCGGTGAAG
AGGD_ECOLI/36-166 TCTTTGCATTTAGGTGCAACACGTATGATTTATAAG...CCTAATTCTTCTGGAGAAACATTGGCAGTTATTAAT---GAACATAACTATCCTATATTAGTCCAAGCGAATGTATTATCA---------------GAGGATCAAAAAAATATTGCACCTTTTATAATTACACCTCCGTTATTTCGACTTGATGCTCTACAATCAAGCCGCCTTCGTATTGTCAAAACAGAA---.........GGAGCTTTTCCAATAGATCGTGAAAGTCTACAATGGATCTGTGTAAAGGCGATTCCTCCAAAATATGAAGACAAATGGGCTAAAGAAGAAGTTAGCGGAAAAAAATCA.....................GATAAAGCAACTATGAATATACAAGTTTCAGTAAGCAGTTGCATTAAACTATTCGTTCGTCCGGCAGATGTGAAA
CS31_ECOLI/30-155 GAAGCTATATTGGGTGCAACAAGAGTAATTTACCAC...CTAGATGGTAATGGTGAAAGTCTAAGAGTTAAAAAT---CCGCAGATTAGTCCAATTCTAATTCAATCTAAAGTAATGGAC---------------GAGGGTAGTAAAGATAATGCGGATTTTATTGTTACCCCCCCTCTTTTTAGACTAGATGCAAAAAGAGAAACTGACATTCGTATAGTTATGGTGAAT---.........GGCTTATACCCAAAAGACAGGGAATCTCTAAAGACCCTCTGTGTGCGAGGAATTCCACCAAAACAAGGAGATTTATGGGCTAACAATGAAAAAGAATTTGTTGGA---.....................ATGAAACTTAACGTTTCAATTAACACA------------TGTATTAAATTAATATTAAGACCACATAATCTTCCT
YHCA_ECOLI/21-136 GGGATGGTTCCTGAAACATCAGTATTGCTGGTTGAT...GAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAAT---ACAGATGATCATCCTTCATTGCTTTACACCACCATTGTTGAT------------TTGCCTGAAAGCAATAAATCAATTCGTTTAATCCCGACTCAGCCCGTTATTCGTGTTGAAGCCGGTCAAGTACAACAGGTTCGATTTTTACTTCAGGCG---.........---ACTGTTCCTCTGCAATCAGAAGAGCTGAAACGCGTAACGTTCGAAGGTATTCCACCAAAAGAT------------------------GACAAGAGCAGCAGA---.....................------GTTACTGTTTCAATTCGTCAG------------GATCTACCTGTACTGATCCACCCGGCTTCCCTGCCG