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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF00333 - Ribosomal_S5)
Ribosomal protein S5, N-terminal domain
(
Pfam
reference: accession no.
PF00333
)
(
Interpro
reference: accession no.
IPR000851
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 68 aa
(ave. pairwise identity: 0.46)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.32)
nucleotides
(available for above)
11 sequences @ 204 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 4.41)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 68 aa
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 5.17)