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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00329 phylogeny
for amino acid alignment


 
(((((Q35521_PHYME/86-153,Q9G8U3_9CRYP/90-157),(Q9G920_OCHDN/85-152,Q9MGA7_9STRA/80-147)),Q9G894_9EUKA/91-158),((NUGM_DICDI/99-166,NUGM_ACACA/97-162),(Q9TAI9_CAFRO/109-176,((Q9G8N3_NAEGR/87-154,Q06329_9TRYP/22-86),(Q9XMS3_TETPY/111-183,Q35370_PARTE/94-161))))),(Q9TCA5_NEPOL/86-153,(((NUGM_CANMA/150-217,Q9UUU0_YARLI/155-222),NUOC_RICPR/86-153),((Q9A6X2_CAUCR/88-155,(Q98KQ7_RHILO/89-156,NUOC1_RHIME/89-156)),((Q9G4B8_9STRA/85-152,(NUOC_NEIMB/94-163,(Q9PGJ3_XYLFA/134-203,(NQO5_PARDE/92-159,NUOC_RHOCA/89-156)))),((NUOC2_RHIME/89-156,(O66826_AQUAE/105-172,O67335_AQUAE/86-152)),(((Q9KGW7_PSEFL/108-174,(Q9I0J9_PSEAE/107-174,(O85275_PECCC/112-179,NUOCD_BUCAI/113-180))),((O25852_HELPY/121-188,Q9PM98_CAMJE/116-183),((NUGC_SYNY3/106-174,((NUGC_MAIZE/87-155,NUGC_MARPO/97-165),NUGC_MESVI/102-170)),(Q9XAQ6_STRCO/167-235,(Q979M2_THEVO/65-133,Q9HRL9_HALN1/101-169))))),((Q9RU88_DEIRA/106-173,NQO5_THETH/90-158),((((HYCE_ECOLI/90-158,HYFG_ECOLI/93-160),Q9UYN4_PYRAB/113-180),Q10884_MYCTU/59-129),((O59105_PYRHO/90-158,Q980H4_SULSO/93-160),((Q9YC25_AERPE/109-179,O28446_ARCFU/283-350),(Q9X0U2_THEMA/84-149,Q9V0S6_PYRAB/85-157))))))))))),((O01602_CAEEL/317-384,Q9VZU4_DROME/145-212),((NUGM_PROWI/86-153,(Q9MFG7_LUPMU/88-155,NUGM_MARPO/87-154)),NUGM_RECAM/94-161)));
(((((Q35521_PHYME/86-153:0.12213,Q9G8U3_9CRYP/90-157:0.29554):0.06772,(Q9G920_OCHDN/85-152:0.10621,Q9MGA7_9STRA/80-147:0.27634):0.07734):0.10774,Q9G894_9EUKA/91-158:0.30189):0.08989,((NUGM_DICDI/99-166:0.41371,NUGM_ACACA/97-162:0.26146):0.15022,(Q9TAI9_CAFRO/109-176:0.23994,((Q9G8N3_NAEGR/87-154:0.00000,Q06329_9TRYP/22-86:1.58999):0.24157,(Q9XMS3_TETPY/111-183:0.57506,Q35370_PARTE/94-161:0.49713):0.47740):0.11552):0.14739):0.08260):0.00593,(Q9TCA5_NEPOL/86-153:0.15760,(((NUGM_CANMA/150-217:0.17206,Q9UUU0_YARLI/155-222:0.10229):0.10730,NUOC_RICPR/86-153:0.44044):0.00000,((Q9A6X2_CAUCR/88-155:0.13899,(Q98KQ7_RHILO/89-156:0.17478,NUOC1_RHIME/89-156:0.12809):0.01916):0.06733,((Q9G4B8_9STRA/85-152:0.28228,(NUOC_NEIMB/94-163:0.32515,(Q9PGJ3_XYLFA/134-203:0.31354,(NQO5_PARDE/92-159:0.09870,NUOC_RHOCA/89-156:0.21537):0.06675):0.02342):0.05544):0.08006,((NUOC2_RHIME/89-156:0.36787,(O66826_AQUAE/105-172:0.44284,O67335_AQUAE/86-152:0.00000):0.49858):0.11169,(((Q9KGW7_PSEFL/108-174:0.15981,(Q9I0J9_PSEAE/107-174:0.12018,(O85275_PECCC/112-179:0.09973,NUOCD_BUCAI/113-180:0.23553):0.07873):0.05637):0.34836,((O25852_HELPY/121-188:0.34972,Q9PM98_CAMJE/116-183:0.31899):0.31315,((NUGC_SYNY3/106-174:0.07596,((NUGC_MAIZE/87-155:0.14416,NUGC_MARPO/97-165:0.14033):0.10811,NUGC_MESVI/102-170:0.06418):0.12846):0.48169,(Q9XAQ6_STRCO/167-235:0.54034,(Q979M2_THEVO/65-133:0.36125,Q9HRL9_HALN1/101-169:0.53336):0.23154):0.04506):0.00000):0.02849):0.11631,((Q9RU88_DEIRA/106-173:0.34882,NQO5_THETH/90-158:0.11114):0.28857,((((HYCE_ECOLI/90-158:0.16820,HYFG_ECOLI/93-160:0.08212):0.19956,Q9UYN4_PYRAB/113-180:0.43908):0.16966,Q10884_MYCTU/59-129:0.78194):0.43526,((O59105_PYRHO/90-158:0.54325,Q980H4_SULSO/93-160:0.51858):0.31540,((Q9YC25_AERPE/109-179:0.51534,O28446_ARCFU/283-350:0.56098):0.13778,(Q9X0U2_THEMA/84-149:0.51225,Q9V0S6_PYRAB/85-157:0.43401):0.23823):0.39314):0.00000):0.14312):0.04290):0.07529):0.20687):0.02767):0.09897):0.08645):0.06626,((O01602_CAEEL/317-384:0.18253,Q9VZU4_DROME/145-212:0.18765):0.11345,((NUGM_PROWI/86-153:0.17770,(Q9MFG7_LUPMU/88-155:0.21217,NUGM_MARPO/87-154:0.05112):0.04479):0.03177,NUGM_RECAM/94-161:0.21680):0.03840):0.00000);