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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00326 phylogeny
for nucleotide alignment


 
(((((((((((((O07834_PSESP/503-721,((PTRB_MORLA/463-681,(Q93EK3_TREDE/466-684,Q92IP3_RICCN/510-728)),((Q8EKF0_SHEON/476-699,Q87DI6_XYLFT/485-703),(Q87JT1_VIBPA/503-721,PTRB_ECOLI/461-679)))),(Q94795_TRYCR/490-709,Q9XYH4_LEIMA/505-724)),((Q8VKE4_MYCTU/483-702,Q8FML7_COREF/483-701),((Q985J8_RHILO/480-699,(Q8YFZ7_BRUME/478-697,Q8UGY8_AGRT5/478-697)),Q89XD8_BRAJA/478-697))),(Q9I440_PSEAE/465-683,Q88E83_PSEPK/462-680)),(Q9KNA2_VIBCH/446-660,(Q8D3Y5_VIBVU/449-671,Q87G50_VIBPA/447-662))),((Q9X5N2_MYXXA/462-678,(PPCE_AERHY/466-683,(((PPCE_PIG/482-707,Q86AS5_DICDI/537-757),Q7XSQ2_ORYSA/505-736),(Q7NMZ0_GLOVI/467-683,((Q8YU28_ANASP/472-688,(Q9F7Q5_PRB01/488-704,((Q87IY8_VIBPA/534-751,Q87G21_VIBPA/458-675),PPCE_FLAME/485-702))),Q8EDJ3_SHEON/505-720))))),Q98L26_RHILO/471-686)),Q9A4W5_CAUCR/598-814),(((((Q7UWF1_RHOBA/620-828,Q9AN37_BRAJA/557-756),Q8PPU4_XANAC/607-813),((Q9A6E0_CAUCR/533-738,((Q9D4G6_MOUSE/673-885,Q965K3_CAEEL/706-915),Q8EAB7_SHEON/558-762)),((((Q9VMM2_DROME/532-739,((P70092_XENLA/542-748,Q8R492_RAT/553-760),(Q7PSF9_ANOGA/524-731,Q9VUH1_DROME/590-795))),Q7PQ17_ANOGA/425-626),Q9VMB4_DROME/711-917),(Q96VT7_ASPNG/668-875,(Q7SHU8_NEUCR/668-875,(DAP2_YEAST/608-815,STE13_YEAST/712-922)))))),(Q8P5L8_XANCP/430-642,((Q8A355_BACTN/87-280,((Q8DIA5_SYNEL/404-614,Q55413_SYNY3/423-633),Q9ZBI6_STRCO/433-644)),Q8KZ44_9PROT/214-427))),P95915_SULSO/363-569)),(((Q9UYB0_PYRAB/418-631,((O58323_PYRHO/394-607,Q9Y9J8_AERPE/343-555),Q9YAW3_AERPE/442-656)),Q7NJX8_GLOVI/499-712),Q9HN07_HALN1/437-657)),(Q8E8W6_SHEON/467-673,Q8AA78_BACTN/483-697)),Q9A6U7_CAUCR/468-679),Q9P778_SCHPO/463-675),DPP5_ASPOR/491-704,DPP5_TRISH/486-699);
(((((((((((((O07834_PSESP/503-721:0.19471,((PTRB_MORLA/463-681:0.31308,(Q93EK3_TREDE/466-684:0.27030,Q92IP3_RICCN/510-728:0.35883):0.10983):0.09362,((Q8EKF0_SHEON/476-699:0.21010,Q87DI6_XYLFT/485-703:0.26763):0.07281,(Q87JT1_VIBPA/503-721:0.21447,PTRB_ECOLI/461-679:0.29502):0.06679):0.07014):0.12518):0.06145,(Q94795_TRYCR/490-709:0.27700,Q9XYH4_LEIMA/505-724:0.08422):0.29248):0.04910,((Q8VKE4_MYCTU/483-702:0.22224,Q8FML7_COREF/483-701:0.22571):0.10744,((Q985J8_RHILO/480-699:0.11461,(Q8YFZ7_BRUME/478-697:0.18273,Q8UGY8_AGRT5/478-697:0.18835):0.04490):0.04603,Q89XD8_BRAJA/478-697:0.18075):0.14276):0.03696):0.08853,(Q9I440_PSEAE/465-683:0.09624,Q88E83_PSEPK/462-680:0.15143):0.07477):0.03720,(Q9KNA2_VIBCH/446-660:0.25565,(Q8D3Y5_VIBVU/449-671:0.19184,Q87G50_VIBPA/447-662:0.24122):0.07845):0.43792):0.15897,((Q9X5N2_MYXXA/462-678:0.20789,(PPCE_AERHY/466-683:0.22583,(((PPCE_PIG/482-707:0.17396,Q86AS5_DICDI/537-757:0.50998):0.12114,Q7XSQ2_ORYSA/505-736:0.24373):0.17573,(Q7NMZ0_GLOVI/467-683:0.15155,((Q8YU28_ANASP/472-688:0.20097,(Q9F7Q5_PRB01/488-704:0.38451,((Q87IY8_VIBPA/534-751:0.17395,Q87G21_VIBPA/458-675:0.22004):0.05883,PPCE_FLAME/485-702:0.31183):0.07327):0.11381):0.07947,Q8EDJ3_SHEON/505-720:0.23508):0.14965):0.08936):0.04861):0.08216):0.10055,Q98L26_RHILO/471-686:0.40314):0.08190):0.39088,Q9A4W5_CAUCR/598-814:0.61473):0.07112,(((((Q7UWF1_RHOBA/620-828:0.29177,Q9AN37_BRAJA/557-756:0.35917):0.19584,Q8PPU4_XANAC/607-813:0.25253):0.31743,((Q9A6E0_CAUCR/533-738:0.41397,((Q9D4G6_MOUSE/673-885:0.34736,Q965K3_CAEEL/706-915:0.41400):0.14778,Q8EAB7_SHEON/558-762:0.40994):0.13307):0.05481,((((Q9VMM2_DROME/532-739:0.33626,((P70092_XENLA/542-748:0.24989,Q8R492_RAT/553-760:0.22585):0.32580,(Q7PSF9_ANOGA/524-731:0.27507,Q9VUH1_DROME/590-795:0.25863):0.05432):0.08208):0.05433,Q7PQ17_ANOGA/425-626:0.40144):0.09734,Q9VMB4_DROME/711-917:0.32387):0.10133,(Q96VT7_ASPNG/668-875:0.17769,(Q7SHU8_NEUCR/668-875:0.15790,(DAP2_YEAST/608-815:0.26150,STE13_YEAST/712-922:0.37801):0.24881):0.08927):0.29390):0.08170):0.13272):0.14519,(Q8P5L8_XANCP/430-642:0.49676,((Q8A355_BACTN/87-280:1.22913,((Q8DIA5_SYNEL/404-614:0.26638,Q55413_SYNY3/423-633:0.27981):0.13766,Q9ZBI6_STRCO/433-644:0.41460):0.08514):0.08043,Q8KZ44_9PROT/214-427:0.72383):0.12612):0.06609):0.01632,P95915_SULSO/363-569:0.98596):0.05903):0.09560,(((Q9UYB0_PYRAB/418-631:0.25855,((O58323_PYRHO/394-607:0.39785,Q9Y9J8_AERPE/343-555:0.29442):0.13911,Q9YAW3_AERPE/442-656:0.31672):0.05331):0.23138,Q7NJX8_GLOVI/499-712:0.33106):0.05403,Q9HN07_HALN1/437-657:0.41814):0.12564):0.21274,(Q8E8W6_SHEON/467-673:0.43620,Q8AA78_BACTN/483-697:0.56676):0.08412):0.04976,Q9A6U7_CAUCR/468-679:0.32078):0.14707,Q9P778_SCHPO/463-675:0.52915):0.13023,DPP5_ASPOR/491-704:0.16696,DPP5_TRISH/486-699:0.19456);