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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00323 - Defensin_1)
Mammalian defensin
(Pfam reference: accession no. PF00323)
(Interpro reference: accession no. IPR006081)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
11 sequences @ 30 aa
(ave. pairwise identity: 0.44)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.76)
nucleotides
(available for above)
10 sequences @ 90 bp
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 3.30)
amino acids, restricted set
(corresp. to available nt seqs)
10 sequences @ 30 aa
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 6.07)