EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00320 alignment
(75 sequences with 135 bp)


Q9XUW7_CAEEL/179-213 TGCTCC......AATTGTGGATGTCGGGAA......ACGAAATTGTGGAGGAGAAATGAG.........CAAGGAGAAACT---......GAGTGCAATCCGTGTAATCTTTACGAACGAGTCAAAGGACATAAA
Q21128_CAEEL/153-187 TGCTCA......AATTGCAAAACACGTGAG......ACGACGCTGTGGCGACGAAATGGA.........GAAGGAGGTGTC---......GAGTGCAACGCCTGCAATCTCTACTTCCGGAAAAACAACCGAAAA
O44353_CAEEL/138-174 TGCTCCaatccaAATTGTAGAACTCGTGAG......ACAACTCTATGGAGAAGAACTGAT.........TCAGGAGCTATT---......GAGTGCAACGGTTGCTCCCTGTACTTCCGAAAAAATGGGATTCAA
O61924_CAEEL/143-177 TGCTCA......CACTGCTCAACAACTACA......ACCACACTTTGGCGTAAAAATGAT.........GAAGGGAATCTT---......GAGTGCAATGCTTGCAACTTGTATTACCGTCACAACAAAGTGAAA
Q9TXV3_CAEEL/265-299 TGCTCC......AATTGCTCCACAATAAAA......ACGACAGCGTGGCGAAGGGATTTG.........GAGGGGAAGCTT---......GTTTGTAACGCGTGTGGATTGTATTATAGGCTGCATAGGACACAT
Q9BIM5_CAEEL/266-300 TGCTCC......AACTGCCGAACCGACAAG......ACAACCGCGTGGCGACGTGACGCC.........GAGGGGAAGCTT---......GTCTGCAATCCGTGTGGGCTCTACTATCGATTGCACAAGGTTCGC
O94720_SCHPO/419-453 TGTGCC......AATTGCTCTTCTACGAAA......ACTTCGTTGTGGCGCAAAGATCGT.........CACGGACAGACT---......GTTTGTAACGCTTGTGGTTTGTATGCCCGTCTTCATGGCCACAAT
Q9NFF4_AEDAE/677-711 TGTTCC......AACTGTAACACCATGAAC......ACTTCGCTCTGGAGACGCAACCAG.........GTCGGAGAACCG---......GTGTGCAATGCCTGCGGTTTGTACTACAAGTTGCACAACGTCAAC
GATB_BOMMO/322-356 TGCACC......AACTGCCAGACCACGGCG......ACGTCCCTGTGGCGCCGCAACGTG.........CAGGGCGAGACG---......GTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACGTCAAC
Q9BPQ2_DROME/539-571 TGCGCC......AACTGTCAGACCAACTCG......ACGACCCTGTGGCGTCGCAACAAC.........GAGGGCAATCCG---......GTGTGCAATGCCTGCGGACTGTACTACAAGCTG------ACAACA
O77157_STRPU/59-93 TGTGCT......AACTGTCACACTAGCACT......ACAACACTGTGGCGTAGGAATAAA.........GACGGTGAACCA---......GTCTGCAATGCTTGTGGCTTGTACTTCAAATTACATGGCGTCAAC
GATA2_MOUSE/349-383 TGTGCA......AATTGTCAGACGACAACC......ACCACCTTATGGCGCCGGAACGCC.........AACGGGGACCCT---......GTGTGCAACGCCTGTGGCCTCTACTACAAGCTGCACAATGTTAAC
ELT1_CAEEL/272-306 TGTGTC......AACTGTCGTACAAATACA......ACAACACTCTGGAGAAGAAATGGA.........GAAGGGCATCCA---......GTGTGCAATGCTTGTGGACTCTACTTTAAACTTCATAAGGTGGAA
Q8IFX0_CIOIN/148-182 TGTTCC......AACTGTAGCACAACCGTT......ACAACATTGTGGCGTAGAAGTCCG.........GACGGAAACCCG---......GTGTGTAACGCGTGTGGTCTCTACCAGAAGTTACACGGGGTTCCT
SRP_DROME/319-353 TGCTCC......AACTGCCACACCACCCAC......ACTTCGTTGTGGCGCCGCAATCCC.........GCCGGAGAGCCC---......GTCTGCAATGCATGCGGCCTGTACTATAAGCTCCACAGTGTCCCA
GATA5_CHICK/239-273 TGCACT......AACTGCCACACAACCAAC......ACCACCCTCTGGAGAAGGAACGCC.........GAAGGGGAGCCC---......GTCTGCAACGCCTGCGGCTTGTACATGAAGCTCCATGGGGTACCA
ELT2_CAEEL/237-271 TGCTCC......AATTGCAATGGTACCAAC......ACAACTCTCTGGAGAAGAAATGCT.........GAAGGAGATCCG---......GTCTGCAATGCTTGCGGGCTTTACTTCAAACTCCATCACATCCCT
Q9BPQ1_DROME/202-236 TGTTCG......AATTGTGGCACCCTCACC......ACAACAATTTGGCGGCGAAGTGTT.........CGAGGAGAGATG---......GTGTGCAACGCCTGCGGATTGTACTTCAAGCTGCATGGGGTCAAC
Q8K1J0_MOUSE/707-741 TGTGCC......AATTGCCTGACCACAAAG......ACCTCTCTCTGGCGAAAGAATGCA.........AATGGCGGATAT---......GTATGCAATGCATGTGGTCTCTACCAGAAACTTCACTCGACTCCC
AREA_ASPNG/676-710 TGTACC......AACTGCTTCACGCAGACC......ACCCCGTTGTGGCGGCGTAATCCT.........GAGGGCCAGCCG---......CTGTGTAACGCATGCGGGCTGTTCCTGAAGCTGCACGGGGTGGTG
GAT1_YEAST/310-344 TGCTCC......AACTGCACAACCTCCACC......ACTCCGCTGTGGAGGAAGGACCCC.........AAGGGTCTTCCC---......CTGTGCAATGCTTGCGGCCTCTTCCTCAAGCTCCACGGCGTCACA
O59842_PENCH/17-51 TGCCAG......AATTGCGGCACCTCTACC......ACCCCCCTGTGGCGTAGGGACGAA.........CTCGGTTCAGTC---......CTTTGCAACGCATGTGGACTCTTCTTGAAACTGCATGGCCGACCT
GLN3_YEAST/306-340 TGTTTC......AATTGTAAAACTTTCAAG......ACACCGCTTTGGAGGAGAAGCCCA.........GAGGGGAATACT---......CTTTGCAATGCCTGCGGTCTTTTCCAGAAATTACATGGTACCATG
Q8SUM6_ENCCU/8-42 TGTAGT......AACTGCAACACCACAGCA......ACGCCTTTGTGGAGAAGGGCCGAC.........GACGGAAGCTAT---......CTCTGCAATGCATGCGGGCTCTACTACAAGATACACGGAAGAAAA
Q8SSI3_ENCCU/127-162 TGTTCC......AACTGTTCTACCACAAGC......ACGCCGTCGTGGAGAAGGGGCGAT.........CAGGGGAAATCTCTT......CTGTGTAATGCCTGTGGGCTTTATCAGAAACTTCACGGGAGAACA
Q8NJS3_CANAL/61-95 TGTTCT......AATTGTGGAACTACCAAA......ACTCCGTTATGGAGAAGAGCCCCA.........GACGGCACACTA---......ATATGCAATGCGTGTGGCTTATATTATCGATCAAATAACACTCAT
URB1_USTMA/338-372 TGCTCC......AACTGCGGTGTTACTTCG......ACTCCGCTTTGGAGAAGAGCCCCC.........GATGGTAGCACC---......ATCTGCAATGCCTGCGGGCTCTACATCAAATCGCACAGCACACAC
O74262_NEUCR/118-152 TGCAGC......AATTGTGGTACGACACAT......ACTCCTCTTTGGCGAAGATCACCT.........CAAGGAGCCATC---......ATTTGCAACGCTTGCGGACTGTACCTAAAGGCGCGTAACGCGGCT
URB1_USTMA/482-516 TGCACC......AATTGCCAGACGACCACC......ACCCCACTGTGGCGACGCGACGAA.........GACGGCAACAAT---......ATCTGCAACGCTTGCGGTCTCTACCATAAGCTACACGGCACACAC
O74262_NEUCR/282-316 TGCCAA......AACTGCGGTACTACCATT......ACTCCGCTCTGGCGAAGGGACGAA.........GCCGGTCATACC---......ATTTGCAATGCGTGCGGTCTCTATTACAAGTTGCACGGTGTGCAT
FEP1_SCHPO/12-46 TGTTCC......AACTGCCACAAAACTACT......ACTTCTTTATGGCGTCGTGGCCCC.........GATAATTCCCTT---......TTGTGCAATGCTTGTGGCTTATATCAAAAACATCGCAAGCATGCC
Q9GPF8_ANOGA/1-32 ------......---TGTGGCAGCTCCGAC......ACACCGCTCTGGCGTCGGGATATC.........GTCGGTCACACG---......CTGTGCAATGCGTGCGCGCTATACACGAGACAGAATCCGGGCACG
GATA6_CHICK/181-215 TGCGTC......AACTGCGGCTCCATCCAG......ACCCCGCTGTGGAGGAGGGACGGC.........ACCGGGAATTAC---......CTGTGCAACGCCTGCGGGCTCTACACCAAAATGAACGGCCTGAGC
GATA2_MOUSE/295-329 TGTGTC......AACTGTGGTGCCACAGCC......ACCCCTCTCTGGCGACGAGATGGC.........ACGGGCCACTAC---......CTGTGCAATGCCTGTGGGCTCTACCACAAGATGAATGGACAGAAC
ELT1_CAEEL/217-251 TGTGTC......AATTGTGGAGTTCACAAT......ACTCCATTATGGCGTCGGGATGGA.........TCAGGAAACTAC---......CTCTGCAACGCATGCGGCCTCTACTTCAAGATGAACCATCATGCT
O94720_SCHPO/365-400 TGTTTT......AACTGTGGAGTCACTGAA......ACGCCTTTATGGAGACGTACATCA.........GATAAGCTTAACTTC......TTGTGCAATGCTTGTGGTCTTTACAACAAACAGTATGGTGTTATG
Q9USM3_SCHPO/372-409 TGTCGT......TGGTGCAACGTGCTGGGCacaggaACATTTTGTGTTCGAAGAGGACCC.........GAAGGAAACAAATCA......TTGTGCAATGCTTGTGGTGTTGCATATGCTAAAACAGGACAATTG
Q9SNJ1_ORYSA/188-223 TGCGGC......CACTGCCAGACGACGGAG......ACGCCGCAGTGGCGGGTGGGGCCG.........GACGGGCCGAGCACG......CTGTGCAACGCGTGCGGCATCCGGTACAGGATTGACCACCTGCTG
Q9SKN6_ARATH/217-252 TGCACT......CATTGCGAGACAACCACT......ACCCCGCAGTGGAGGGAAGGACCT.........AATGGGCGTAAAACC......CTTTGCAATGCTTGTGGAATCCGCTTTAGATCGGGCCGTCTTGTT
Q9AVU3_TOBAC/202-237 TGCACA......CATTGTCAAGTCACAAAG......ACACCTCAGTGGAGAGAGGGACCA.........CTGGGGCCGAAGACA......CTATGCAACGCCTGTGGAGTCCGCTATCGTTCAGGGCGATTATTC
Q8H036_ORYSA/124-159 TGCACC......CACTGCGCCGTGGATGAG......ACGCCGCAGTGGCGGCTCGGGCCG.........GACGGCCCCCGCACG......CTGTGCAACGCGTGCGGCGTGCGGTTCAAGTCCGGGCGCCTCTTC
O49742_ARATH/182-217 TGCAGC......CATTGTGGCACAAACAAC......ACACCACAGTGGAGAACCGGTCCG.........GTCGGTCCAAAAACC......TTATGTAATGCATGTGGAGTCCGGTTTAAGTCTGGTAGGCTCTGC
O49740_ARATH/196-231 TGTCAA......CACTGTGGAGCGGAGAAG......ACTCCGCAATGGAGGGCAGGACCA.........GCGGGGCCTAAGACT......CTGTGTAACGCTTGTGGCGTGAGGTATAAGTCCGGGAGGCTAGTT
Q9M1U2_ARATH/117-152 TGTTCA......CATTGCGGGACGAGAAAG......ACTCCGCTATGGAGAGAAGGACCG.........AGAGGAGCGGGAACG......CTATGTAACGCGTGCGGGATGCGATACAGGACAGGTCGGCTACTT
Q8LMY5_ORYSA/65-100 TGCCGG......CACTGCGGGACGACGGAG......ACGCCGCAGTGGCGCCATGGCCCG.........GAGGGCCACCGCACG......CTGTGCAACGCGTGCAGCATGCGCTACCGGAGCGGCAAGCTGGTG
Q94LT1_ORYSA/455-490 TGCACG......CACTGCGGGACGACGAAG......ACGCCGGCGTGGCTGAGTGGTCCG.........GACAGCCGCGGCAAG......CTGTGCAACGCGTGCGGGAAGCAGTACAGGAAAGGTCGGCTGGTG
Q8LMY5_ORYSA/237-272 TGCGCG......CACTGCGGGACGACGAAG......ACGCCGGCGTGGCGCCTTGGCCCG.........GACAGCCGCCGCAAG......CTGTGCAACGCGTGCGGCAACAAGTACCGGAGCGGCCAGCTGAAC
Q9LT45_ARATH/159-196 TGTACGaacatgAATTGTAACGCACTTAAC......ACTCCTATGTGGCGAAGAGGTCCT.........CTTGGTCCTAAGAGT......TTATGCAATGCTTGTGGGATCAAGTTCAGGAAGGAGGAAGAGAGG
O23219_ARATH/77-112 TGCGCC......AACTGCGACACCACTTCT......ACTCCTCTTTGGAGAAACGGTCCA.........AGAGGTCCCAAGTCG......TTGTGTAATGCGTGTGGAATCCGATTCAAGAAAGAAGAGAGACGT
Q8VZC1_ARATH/232-267 TGTTCG......GATTGTAACACCACCAAG......ACTCCTCTTTGGCGAAGTGGACCT.........CGAGGTCCCAAGTCT......CTTTGTAACGCATGTGGTATACGGCAAAGAAAGGCAAGGCGAGCC
O04636_ARATH/458-493 TGCAGT......GAGTGTAAGACCACCAAG......ACACCAATGTGGAGAGGTGGACCA.........ACTGGTCCTAAGTCA......CTTTGCAATGCATGTGGAATTAGACACAGAAAACAGAGACGATCA
Q8LQW5_ORYSA/21-56 TGCGTC......GAATGCCGCGCCACCACC......ACGCCCATGTGGCGCAGCGGCCCG.........ACCGGCCCCAGGTCT......CTATGCAACGCTTGCGGAATCCGGTACCGGAAGAAGAGGAGGCAG
Q8GW81_ARATH/39-74 TGCGTT......GATTGCGGAACAAGCAGG......ACTCCTCTTTGGCGTGGTGGACCT.........GCTGGCCCTAAATCA......TTGTGCAATGCGTGTGGTATCAAGAGCAGAAAGAAGAGACAAGCA
Q8X0W7_NEUCR/393-428 TGCCAT......AGCTGCAATAGGATCGAT......ACTCCCGAATGGAGGCGCGGTCCA.........GACGGCGCGAGAACT......CTTTGCAATGCCTGCGGGTTGCACTACGCCAAACTTGAGCGCAAA
WC2_NEUCR/468-503 TGCACC......GACTGCGGTACGCTCGAT......TCCCCCGAATGGCGAAAAGGCCCT.........AGTGGACCCAAGACA......CTATGCAATGCCTGCGGTCTTCGCTGGGCAAAGAAAGAGAAAAAG
GAT2_YEAST/472-507 TGTTTC......CATTGCGGGGAGACCGAG......ACTCCAGAATGGAGAAAGGGACCA.........TATGGCACAAGAACT......TTGTGTAATGCCTGTGGGTTATTTTATAGGAAAGTCACCAAGAAA
Q8GXL7_ARATH/45-82 TGTCGA......CACTGTGGAACAAGTGAGaagtcaACTCCAATGATGCGACGTGGACCT.........GATGGGCCAAGAACA......CTTTGTAATGCGTGTGGACTGATGTGGGCAAACAAGGGGACTCTT
WC1_NEUCR/934-969 TGTGCA......AATTGCCATACGAGGAAC......ACGCCCGAATGGCGGCGTGGGCCA.........AGCGGGAATCGAGAT......CTATGCAACAGTTGTGGGTTGAGATGGGCAAAGCAGACTGGGCGC
GAT3_YEAST/72-108 TGTCCA......CAGTGTGCGGTGATAAAA...actTCTCCGCAATGGAGAGAGGGTCCT.........GATGGAGAGGTGACA......TTGTGTAATGCCTGTGGATTATTTTATAGAAAAATATTTTTGGTT
GAT4_YEAST/53-89 TGTGGG......CAATGTGGAGAGATTAAG...actTCATTACAATGGAGGGAGGGCCCT.........AACGGTGCTGCTTGC......CTGTGTAATGCTTGTGGGTTGTTTTTTAGAAAATTGATTCTGCGC
Q8W4H1_ARATH/7-42 TGCTAC......CACTGTGGAGTTACAAAC......ACACCTTTGTGGAGAAATGGACCA.........CCAGAGAAGCCGGTA......TTGTGCAATGCGTGTGGATCGCGTTGGAGGACAAAGGGAACACTT
P90523_DICDI/294-329 TGTGAA......TTTTGTGGCTCATCACAA......ACCCCAACATGGAGAAGAGGTCCA.........TCTGGCAAAGGTTCA......TTATGTAATGCCTGTGGTATTAAATGGAGATTAAAAGGTAAAGAC
ECM23_YEAST/132-167 TGCGCC......ACTTGTGGTGACACCTGG......ACTTCTCAGTGGAGAAGTGGACCT.........AATGGAAATGTTGAG......CTATGTAGTCGATGTGGCATAGCATATAGGAAAAAAATGGAGAAA
SRD1_YEAST/168-203 TGCTCT......AAATGTAAAGACACTTGG......ACAATTCAATGGCGTAGTGGACCC.........GACCAAAACAGGGAA......CTTTGTAGTCCCTGTGGACTCGCCTATGGAAAAAGACTGAAGAAG
AMS2_SCHPO/351-388 TGTCAA......AACTGTGGAACCATCAAA......ACTGCCAATTGGCGCAATGCTACGtac...atgAACATAACTTTGATG......CTTTGTAATGCATGTGGTATATATTGGACGAGTCGGCGCTCGATG
Q8TGB9_CANAL/365-401 TGCATA......TCGTGTGGGTCAGACCAA......TCACCATGCTGGAGACCATCCTGGtctattaaaCAAGGACAA------......TTGTGTAATTCATGTGGGTTGAGGTATAAAAAGACAAAGGCTAGA
ASH1_YEAST/499-536 TGCGTG......TCGTGTCATTCGAGTGAT......TCGCCCTGTTGGAGGCCATCGTGGtcg...ccaAGAAAGCAAGATCAG......CTATGTAACTCTTGTGGTCTTCGATATAAAAAAACACATACAAGA
Q9GSP3_CAEEL/114-149 TGCTCA......AATTGTTCAGTAACTGAA......ACAATTCGTTGGAGGAATATTCGA.........TCAAAGGAAGGAATT......CAATGTAATGCTTGTTTCATTTATCAACGGAAATATAATAAGACT
Q8IFX0_CIOIN/97-131 TGCGTG......AACTGTGGCGCCATCTCG......GCCACGTCGTGGCGCCGAGACGCC.........TCAGGACACTTT---......CTGTGCAGCACGTGTGGCGCGTGTAGGAGTGGTAGCTATATGCGG
Q95Y41_CAEEL/275-309 TGTGAG......AATTGCAATGCAAAAAGTgatctgTTGATTCTAAATCGT---------.........GTAATGTCGCGTCAC......GAATGTAAACCGTGTATCCTTTATTTCCGTTTGATGCGTGTTCCA
P66B_MOUSE/421-455 TGTGCC......CAGTGCCGCACAGATTTC......ACCCCTCACTGGAAGCAAGAAAAG.........AATGGTAAGATC---......CTCTGTGAGCAGTGTATGACTTCCAACCAGAAAAAGGCTCTAAAA
Q95TP6_DROME/155-192 TGCGAA......TCGTGCGGTACAACGAAA......TCATCACAGTGGAACTCGGTCAGC.........AGTGGGCACAGTACGagccgcCTTTGCCTGAGCTGCTGGGAGTACTGGCGGAGGTACGGCAGTATG
MTA2_HUMAN/367-404 TGTGAG......AGTTGCCACACCACACAG......TCTGCTCAGTGGTATGCCTGGGGCcca...cctAACATGCAGTGCCGC......CTCTGTGCTTCCTGTTGGATCTACTGGAAGAAGTATGGGGGACTG
EGL27_CAEEL/439-472 TGTCAT......CATTGTTACGGTGCAGAA......AGTAAAGACTGGCATCACGCAAAC.........---GGTCTTTTG---......CTGTGCACAGATTGTCGATTGCACTATAAGAAGTACGGACAACTT
O75046_HUMAN/267-302 TGCCGC......CACTGCTTCACCACCACC......TCCAAAGATTGGCACCACGGAGGC.........CGGGAGAACATCCTG......CTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTC