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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00313 - CSD)
'Cold-shock' DNA-binding domain
(Pfam reference: accession no. PF00313)
(Interpro reference: accession no. IPR002059)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
41 sequences @ 75 aa
(ave. pairwise identity: 0.46)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 16.32)
nucleotides
(available for above)
38 sequences @ 225 bp
(ave. pairwise identity: 0.52)
New Hampshire format
(total tree length: 12.70)
amino acids, restricted set
(corresp. to available nt seqs)
38 sequences @ 75 aa
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 15.02)