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pan•dit 		PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00304 phylogeny
for restricted amino acid alignment


 
(((((((((((((((THG_PETIN/32-78,Q8L698_WHEAT/34-82),(DEF2_CAPAN/28-74,(((THGF_HELAN/32-78,LCR70_ARATH/31-77),Q39403_BRACM/31-77),(LCR74_ARATH/27-73,(SRP_SOYBN/29-74,Q9FQ14_CITPA/27-73))))),(P322_SOLTU/28-74,(O24225_ORYSA/34-80,Q93WS9_MUSAC/3-49))),Q8LEG6_ARATH/30-76),(DEF1_CAPAN/28-74,Q948T4_PYRPY/41-87)),LCR72_ARATH/29-73),Q40779_PICAB/34-82),((Q9XHE3_CAPCH/28-75,(Q40128_LYCES/27-73,(((DEF2_PETHY/26-74,DEF1_PETHY/26-72),O24105_9SOLA/26-72),O24104_9SOLA/8-54))),Q948T2_PYRPY/35-81)),((Q8IRD6_DROME/26-71,Q8IRD7_DROME/25-71),(DMYC_DROME/25-70,Q9VZQ5_DROME/23-69))),(D230_PEA/28-72,((DR39_PEA/29-74,10KD_VIGUN/29-75),Q9FPM3_MEDSA/28-72))),Q39999_HORVU/35-82),Q40539_TOBAC/32-82),(AFP4_RAPSA/31-80,Q9FZ31_ARATH/30-80)),LCR78_ARATH/29-78),ASF1_HELAN/16-65,Q8LSM8_HELAN/29-78);
(((((((((((((((THG_PETIN/32-78:0.12234,Q8L698_WHEAT/34-82:0.49463):0.01561,(DEF2_CAPAN/28-74:0.14470,(((THGF_HELAN/32-78:0.11358,LCR70_ARATH/31-77:0.16577):0.00000,Q39403_BRACM/31-77:0.14161):0.00000,(LCR74_ARATH/27-73:0.18225,(SRP_SOYBN/29-74:0.25995,Q9FQ14_CITPA/27-73:0.16068):0.08762):0.19863):0.09053):0.02612):0.06541,(P322_SOLTU/28-74:0.12928,(O24225_ORYSA/34-80:0.10647,Q93WS9_MUSAC/3-49:0.20627):0.11211):0.04865):0.13824,Q8LEG6_ARATH/30-76:0.20911):0.11461,(DEF1_CAPAN/28-74:0.39614,Q948T4_PYRPY/41-87:0.27137):0.06472):0.11821,LCR72_ARATH/29-73:0.38771):0.09437,Q40779_PICAB/34-82:0.23867):0.19707,((Q9XHE3_CAPCH/28-75:0.28795,(Q40128_LYCES/27-73:0.09304,(((DEF2_PETHY/26-74:0.02994,DEF1_PETHY/26-72:0.22103):0.32800,O24105_9SOLA/26-72:0.04202):0.10529,O24104_9SOLA/8-54:0.22874):0.26346):0.09183):0.33617,Q948T2_PYRPY/35-81:0.30136):0.15743):0.27285,((Q8IRD6_DROME/26-71:0.09336,Q8IRD7_DROME/25-71:0.29083):0.21646,(DMYC_DROME/25-70:0.00000,Q9VZQ5_DROME/23-69:0.42328):0.10306):0.55895):0.32097,(D230_PEA/28-72:0.11083,((DR39_PEA/29-74:0.30238,10KD_VIGUN/29-75:0.04591):0.21183,Q9FPM3_MEDSA/28-72:0.12007):0.10757):0.37146):0.17436,Q39999_HORVU/35-82:0.93722):0.51710,Q40539_TOBAC/32-82:0.50738):0.35297,(AFP4_RAPSA/31-80:0.22899,Q9FZ31_ARATH/30-80:0.78273):0.34727):0.00000,LCR78_ARATH/29-78:0.36138):0.14233,ASF1_HELAN/16-65:0.37861,Q8LSM8_HELAN/29-78:0.17749);