EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00304 alignment
(39 sequences with 177 bp)


LCR72_ARATH/29-73 AGAACTTGTGAGTCACCAAGTAACAAGTTC...CAAGGAGTTTGTCTCAACTCACAGAGC---...TGTGCCAAAGCTTGCCCTAGC......GAAGGTTTTTCA.........GGCGGTCGATGTAGT------...------AGTCTCCGT...TGCTACTGCTCCAAAGCCTGC
Q9FQ14_CITPA/27-73 AGGGTGTGTCAGTCACAGAGCCATCATTTC...CATGGCGCATGCTTTAGCCACCACAAC---...TGTGCTTTTGTCTGCAGAAAC......GAAGGCTTCTCT.........GGTGGCAAATGCCGTGGA---...---GTCCGTCGCCGC...TGCTTTTGCTCAAAGCTTTGC
SRP_SOYBN/29-74 AGAGTGTGTGAGTCACAAAGCCACGGGTTC...CATGGTTTGTGTAATAGAGACCACAAC---...TGTGCTTTGGTCTGCAGGAAC......GAAGGTTTCTCC.........GGTGGCAGGTGCAAA------...---CGTTCGCGCCGC...TGCTTTTGCACCAGGATTTGT
LCR74_ARATH/27-73 AGGACATGCCAATCAAAGAGCCACCACTTC...AAATACATGTGTACGTCCAACCACAAC---...TGTGCCATAGTTTGCCGTAAC......GAGGGATTTTCC.........GGTGGTCGCTGCCATGGC---...---TTCCATCGCCGT...TGCTACTGCACCCGCCTTTGC
Q93WS9_MUSAC/3-49 AGGACGTGCGAGTCGGCGAGCACCAGGTTC...AAGGGGACGTGCGTGAGGAGCAGCAAT---...TGCGCCAGCGTCTGCCAGGGC......GAGGGCTTCCCC.........GACGGCAAGTGCGAGGGC---...---GTCCGTCGCCGG...TGCATGTGCAGGAAGCCCTGC
O24225_ORYSA/34-80 CGGACGTGCGAGTCGCAAAGCCACCGGTTC...AAGGGCCCGTGCGCCCGCAAGGCGAAC---...TGCGCCAGCGTATGCAACACG......GAGGGCTTCCCC.........GACGGCTACTGCCACGGC---...---GTCCGCCGCCGC...TGCATGTGCACCAAGCCCTGC
THG_PETIN/32-78 AGGACCTGTGAGTCACAGAGCCACCGTTTC...CATGGAACATGTGTTAGGGAGAGCAAC---...TGTGCTTCCGTTTGCCAGACA......GAGGGCTTCATC.........GGCGGCAACTGCCGTGCG---...---TTCCGCCGTCGT...TGCTTCTGCACCAGAAACTGT
P322_SOLTU/28-74 AGACATTGCGAGTCGTTGAGCCATCGTTTC...AAGGGACCATGTACGAGAGATAGCAAT---...TGTGCTTCGGTCTGTGAGACC......GAAAGATTTTCC.........GGTGGCAATTGCCATGGA---...---TTCCGTCGCCGT...TGCTTTTGCACTAAGCCATGC
Q8LEG6_ARATH/30-76 CGGACGTGTGAAACGAGTAGCAACTTGTTC...AATGGACCATGTCTGAGCTCAAGCAAT---...TGCGCTAATGTTTGCCACAAT......GAAGGTTTTTCA.........GATGGTGACTGCCGTGGA---...---TTCCGTCGTCGC...TGTTTGTGCACCAGACCCTGT
LCR70_ARATH/31-77 CGCACGTGTGCGTCGCAGAGCCAAAGATTC...AAGGGTAAATGCGTGAGCGATACAAAC---...TGCGAAAACGTGTGCCACAAC......GAAGGCTTCCCC.........GGAGGTGATTGCCGTGGA---...---TTCCGTCGTCGT...TGCTTCTGCACCAGAAATTGC
THGF_HELAN/32-78 AGGACATGCGAGTCGCAGAGCCACAAGTTC...AAGGGGACGTGCTTGAGCGACACCAAC---...TGTGCCAACGTGTGCCACTCT......GAGAGGTTTTCT.........GGTGGCAAATGCCGTGGG---...---TTTCGACGCCGG...TGTTTCTGCACCACGCATTGC
Q39403_BRACM/31-77 CGCACGTGTGAGTCGAAGAGCCATAGGTTC...AAGGGTACATGTGTGAGCTCAACAAAC---...TGCGGAAACGTGTGTCACAAC......GAAGGTTTTGGC.........GGAGGTAAATGCCGTGGT---...---TTCCGCGTTCGT...TGCTACTGCACCAGACATTGC
DEF2_CAPAN/28-74 AGGACTTGTGAGTCGCAGAGCCATAGGTTC...AAGGGTTTGTGCTTCAGTAAGAGCAAC---...TGTGGTTCCGTTTGCCACACC......GAGGGCTTTAAC.........GGAGGCCACTGCCGTGGC---...---TTTCGCCGCCGT...TGCTTCTGCACTCGACACTGT
Q948T4_PYRPY/41-87 AGGACCTGTGAGGCTGCAAGCGGCAAGTTC...AAGGGGATGTGCTTTTCGTCTAACAAC---...TGTGCAAACACCTGCGCAAGA......GAGAAATTCGAT.........GGAGGCAAATGCAAGGGC---...---TTCCGCCGTAGA...TGCATGTGCACCAAAAAGTGC
Q8L698_WHEAT/34-82 CGGACGTGCCTGTCGCAGAGCCACAAGTTC...AAGGGCACCTGCCTCAGCAACAGCAAC---...TGCGCCGCCGTGTGCCGCACC......GAGAACTTCCCC.........GACGGCGAGTGCAACACGCAC...CTCGTCGAGCGCAAG...TGCTACTGCAAGCGGACCTGC
Q40779_PICAB/34-82 CGAACCTGCAAAACCCCAAGCGGCAAATTC...AAAGGAGTTTGCGCGAGTAGCAACAAC---...TGCAAAAATGTTTGCCAAACT......GAGGGATTTCCA.........TCGGGAAGCTGCGATTTCCAT...GTGGCCAACAGAAAG...TGCTACTGCTCCAAGCCCTGC
DEF1_CAPAN/28-74 AAGATCTGCGAGGCGTTGAGCGGCAACTTC...AAGGGGTTGTGCCTTAGTAGCCGCGAT---...TGTGGTAATGTTTGCCGTAGA......GAGGGATTTACC.........GATGGCTCTTGCATTGGA---...---TTCCGTCTTCAA...TGCTTCTGCACGAAGCCCTGT
Q9XHE3_CAPCH/28-75 AACATTTGCAAAACAACAAGCAAACATTTT...AAAGGATTATGTTTTGCCGACTCTAAA---...TGTAGAAAAGTTTGTATCCAG......GAGGATAAATTT......gaaGATGGTCATTGTAGCAAA---...---CTCCAAAGGAAG...TGCCTATGCACTAAGAATTGT
Q40128_LYCES/27-73 CAAATTTGCAAAGCACCAAGCCAAACTTTC...CCAGGATTATGTTTTATGGACTCATCA---...TGTAGAAAATATTGTATCAAA......GAGAAATTTACT.........GGTGGACATTGTAGCAAA---...---CTCCAAAGGAAG...TGTCTATGCACTAAGCCATGT
Q948T2_PYRPY/35-81 AAGATCTGTGAGGTTCCAAGCACCCTGTTC...AAAGGGTTGTGCTTTTCGTCTAACAAC---...TGTAAACACACCTGTAGAAAG......GAACAATTCACC.........AGAGGCCATTGTAGTGTC---...---TTGACTCGTGCT...TGTGTGTGCACCAAAAAGTGC
DEF1_PETHY/26-72 GCAACTTGCAAGGCTGAATGCCCAACATGG...GATTCCGTCTGTATCAATAAAAAACCA---...TGTGTAGCGTGTTGCAAAAAG......GCAAAGTTCTCT.........GATGGGCACTGCAGCAAA---...---ATACTCAGAAGA...TGTCTGTGCACTAAGGAGTGT
DEF2_PETHY/26-74 GGAACTTGCAAGGCTGAATGCCCAACTTGG...GAAGGAATATGTATCAATAAAGCCCCA---...TGTGTAAAATGTTGCAAAGCAcaaccaGAAAAATTCACC.........GACGGGCACTGCAGTAAA---...---ATACTCCGAAGA...TGCCTATGCACTAAGCCGTGT
O24105_9SOLA/26-72 AAAGATTGCAAAACAGAAAGCAATACATTC...CCTGGAATATGCATTACCAAACCACCA---...TGCAGAAAAGCTTGTATCAAA......GAGAAATTTACT.........GATGGTCATTGTAGCAAA---...---ATCCTCAGAAGG...TGTCTATGCACTAAGCCATGT
O24104_9SOLA/8-54 CAAGCTAGAGAATGCGCAAGAGAAATTTTC...ACTGGACTATGCATTACCAATCCACAA---...TGCAGAAAAGCTTGTATCAAA......GAGAAATTTACT.........GATGGTCATTGTAGCAAA---...---ATCCTCAGAAGG...TGTCTATGCACTAAGCCATGC
Q39999_HORVU/35-82 CGGATTTGCACGGGGAAGAGCCAGCACCAC...CATTTCCCGTGCTTCTCGGACAAGAGC---...TGCGCCAGGAATTGCGTCAGC......GAGCACGGCGCGcactggacgGCCGGCTACTGCCAC------...------CTCAGGCGC...TGCACCTGCCAGAGGGAATGC
Q9FPM3_MEDSA/28-72 AGAACATGTGAGAATTTGGCAGATAAATAT...AGGGGACCATGCTTTAGT------GGT---...TGTGACACTCACTGCACAACC......AAAGAGAACGCA......gttAGTGGAAGGTGTAGG------...---GACGACTTCCGC...TGCTGGTGTACTAAAAGATGT
D230_PEA/28-72 AACACATGTGAGAATTTGGCTGGTTCATAT...AAGGGAGTATGCTTC------GGTGGA---...TGTGACCGTCACTGTAGAACA......CAAGAGGGCGCA......attAGCGGCAGATGCAGG------...---GATGACTTTCGC...TGTTGGTGCACTAAAAACTGT
10KD_VIGUN/29-75 AAGACTTGCGAGAACCTGGTGGATACATAC...AGGGGTCCGTGCTTCACCACTGGGAGC---...TGCGATGATCACTGCAAGAAC......AAAGAACACTTG......ctgAGTGGCAGGTGCAGG------...---GATGATGTCCGG...TGTTGGTGCACCAGAAACTGT
DR39_PEA/29-74 AACACTTGTGAGCATTTGGCTGATACATAC...AGGGGAGTATGCTTCACGAATGCTAGC---...TGTGATGATCACTGCAAGAAC......AAAGCGCACTTA......atcAGTGGCACGTGCCAT------...------GACTGGAAA...TGTTTCTGCACTCAAAACTGT
Q9VZQ5_DROME/23-69 TCACATGCCGACTGCCTTTCCGGAAGATAT...AGGGGTTCCTGTGCTGTGTGGCACAGGAAGaagTGCGTAGATATCTGCCAGAGG......GAAGGGCGAACC.........AGTGGACACTGCAGC------...---CCCAGTCTAAAA...TGCTGGTGCGAAGGA---TGC
DMYC_DROME/25-70 GATGCC---GACTGCCTGTCCGGAAGATAC...AAGGGTCCCTGTGCCGTCTGGGACAACGAGaccTGTCGTCGTGTGTGCAAGGAG......GAGGGACGCTCC.........AGTGGCCACTGCAGC------...---CCCAGTCTGAAG...TGCTGGTGCGAAGGA---TGC
Q8IRD7_DROME/25-71 TTGGCACGTGATTGCCTATCTGGAACTTTC...GGAGGTCCTTGCTGGGCCTGGAGTGGAGAAaagTGCCGCCGTCTCTGCATTGAG......GAGGGACATGTC.........AGTGGACACTGCAGT------...---GGCGCAATGAAG...TGCTGGTGCGAAGGA---TGC
Q8IRD6_DROME/26-71 GCCGTG---GATTGCCCATCTGGAAGATTC...AGTGGTCCTTGCTGGGCCTGGGATGGAGAGcagTGCCGTCGCCTCTGCAGGGAG......GAAGGACGTGTC.........AGTGGACACTGCAGT------...---GCCAGTCTGAAG...TGCTGGTGCGAACAA---TGC
Q9FZ31_ARATH/30-80 GAGCTTTGCAAAAGGGAAAGTGAGACATGG...TCAGGACGTTGTGTAAACGATTATCAG---...TGCAGAGATCATTGCATTAAC......AATGATAGAGGA......aatGATGGATATTGCGCTGGTGGC...TACCCATGGTACAGAtcaTGTTTCTGTTTCTTCTCTTGC
LCR78_ARATH/29-78 AGAATTTGCGAGAGGAGAAGCAAGACATGG...ACAGGGTTTTGTGGCAACACTCGTGGC---...TGTGACAGTCAGTGTAAGAGA......TGGGAACGTGCT......tcaCACGGGGCTTGTCACGCTCAG...TTCCCGGGTTTCGCA...TGTTTCTGCTACTTCAATTGC
Q8LSM8_HELAN/29-78 GAATTATGTGAGAAGGCAAGCCAGACATGG...TCCGGAACATGTGGCAAGACAAAACAC---...TGTGATGACCAGTGCAAGTCT......TGGGAGGGTGCA......gccCATGGAGCTTGTCACGTGCGC...GATGGGAAACACATG...TGCTTCTGCTACTTCAACTGT
ASF1_HELAN/16-65 AAAATATGTGAAAAACCGAGTAAGACTTGG...TTTGGAAACTGCAAAGACACAGATAAG---...TGTGACAAGCGGTGTATAGAC......TGGGAGGGTGCA......aagCATGGAGCTTGTCATCAACGT...GAAGCCAAACACATG...TGCTTTTGCTACTTTGATTGT
AFP4_RAPSA/31-80 AAGTTGTGCGAGAGGTCTAGTGGGACATGG...TCAGGAGTATGTGGAAATAATAATGCT---...TGCAAGAACCAGTGCATCAAC......CTCGAGGGAGCA......cgaCATGGATCTTGCAACTATATT...TTCCCATATCACAGG...TGTATCTGCTACTTCCCATGT
Q40539_TOBAC/32-82 AAACTTTGTCGAAGGAAGAGCAAGACATTT...TCTGGCTATTGCTTTATTAGTGAACAC---...TGCGACGAAGAATGCAAAGAG......AAAGAGGGGGCA......aagAGGGGTATGTGCATTAAGAAGagcATCTTTAGACGTTAT...TGCTACTGCTACCACAAATGC