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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00304 alignment
(51 sequences with 59 aa)


LCR72_ARATH/29-73 RTCESPSNKF.QGVCLNSQS-.CAKACPS..EGFS...GGRCS--.--SLR.CYCSKAC
Q9FQ14_CITPA/27-73 RVCQSQSHHF.HGACFSHHN-.CAFVCRN..EGFS...GGKCRG-.-VRRR.CFCSKLC
THGC_VIGUN/1-47 RVCESQSHGF.KGACTGDHN-.CALVCRN..EGFS...GGNCRG-.-FRRR.CFCTLKC
SRP_SOYBN/29-74 RVCESQSHGF.HGLCNRDHN-.CALVCRN..EGFS...GGRCK--.-RSRR.CFCTRIC
LCR74_ARATH/27-73 RTCQSKSHHF.KYMCTSNHN-.CAIVCRN..EGFS...GGRCHG-.-FHRR.CYCTRLC
Q93WS9_MUSAC/3-49 RTCESASTRF.KGTCVRSSN-.CASVCQG..EGFP...DGKCEG-.-VRRR.CMCRKPC
O24225_ORYSA/34-80 RTCESQSHRF.KGPCARKAN-.CASVCNT..EGFP...DGYCHG-.-VRRR.CMCTKPC
THG_PETIN/32-78 RTCESQSHRF.HGTCVRESN-.CASVCQT..EGFI...GGNCRA-.-FRRR.CFCTRNC
P322_SOLTU/28-74 RHCESLSHRF.KGPCTRDSN-.CASVCET..ERFS...GGNCHG-.-FRRR.CFCTKPC
Q8LEG6_ARATH/30-76 RTCETSSNLF.NGPCLSSSN-.CANVCHN..EGFS...DGDCRG-.-FRRR.CLCTRPC
LCR70_ARATH/31-77 RTCASQSQRF.KGKCVSDTN-.CENVCHN..EGFP...GGDCRG-.-FRRR.CFCTRNC
THGF_HELAN/32-78 RTCESQSHKF.KGTCLSDTN-.CANVCHS..ERFS...GGKCRG-.-FRRR.CFCTTHC
Q39403_BRACM/31-77 RTCESKSHRF.KGTCVSSTN-.CGNVCHN..EGFG...GGKCRG-.-FRVR.CYCTRHC
DEF2_CAPAN/28-74 RTCESQSHRF.KGLCFSKSN-.CGSVCHT..EGFN...GGHCRG-.-FRRR.CFCTRHC
Q948T4_PYRPY/41-87 RTCEAASGKF.KGMCFSSNN-.CANTCAR..EKFD...GGKCKG-.-FRRR.CMCTKKC
Q8L698_WHEAT/34-82 RTCLSQSHKF.KGTCLSNSN-.CAAVCRT..ENFP...DGECNTH.LVERK.CYCKRTC
Q40779_PICAB/34-82 RTCKTPSGKF.KGVCASSNN-.CKNVCQT..EGFP...SGSCDFH.VANRK.CYCSKPC
THG1_WHEAT/1-47 KICRRRSAGF.KGPCMSNKN-.CAQVCQQ..EGWG...GGNCDG-.-PFRR.CKCIRQC
THG1_MAIZE/1-47 RVCRRRSAGF.KGVCMSDHN-.CAQVCLQ..EGYG...GGNCDG-.-IMRQ.CKCIRQC
DEF2_SPIOL/6-52 RKCKTPSKTF.KGICTRDSN-.CDTSCRY..EGYP...AGDCKG-.-IRRR.CMCSKPC
FAB1_VICFA/3-47 GRCKVKSNRF.HGPCLTDTH-.CSTVCRG..EGYK...GGDCHG-.-LRRR.CMCL--C
DEF1_CAPAN/28-74 KICEALSGNF.KGLCLSSRD-.CGNVCRR..EGFT...DGSCIG-.-FRLQ.CFCTKPC
LCR75_ARATH/24-70 QMCEAKSLDW.KGMCLKWRN-.CRQVCIS..EGFT...DGRCKG-.-FTRK.CICSKPC
AX2_BETVU/1-46 ATCRKPSMYF.SGACFSDTN-.CQKACNR..EDWP...NGKCL--.-VGFK.CECQRPC
AX1_BETVU/1-46 AICKKPSKFF.KGACGRDAD-.CEKACDQ..ENWP...GGVCV--.-PFLR.CECQRSC
Q9XHE3_CAPCH/28-75 NICKTTSKHF.KGLCFADSK-.CRKVCIQ..EDKF..eDGHCSK-.-LQRK.CLCTKNC
Q40128_LYCES/27-73 QICKAPSQTF.PGLCFMDSS-.CRKYCIK..EKFT...GGHCSK-.-LQRK.CLCTKPC
Q948T2_PYRPY/35-81 KICEVPSTLF.KGLCFSSNN-.CKHTCRK..EQFT...RGHCSV-.-LTRA.CVCTKKC
DEF1_PETHY/26-72 ATCKAECPTW.DSVCINKKP-.CVACCKK..AKFS...DGHCSK-.-ILRR.CLCTKEC
DEF2_PETHY/26-74 GTCKAECPTW.EGICINKAP-.CVKCCKAqpEKFT...DGHCSK-.-ILRR.CLCTKPC
O24105_9SOLA/26-72 KDCKTESNTF.PGICITKPP-.CRKACIK..EKFT...DGHCSK-.-ILRR.CLCTKPC
O24104_9SOLA/8-54 QARECAREIF.TGLCITNPQ-.CRKACIK..EKFT...DGHCSK-.-ILRR.CLCTKPC
Q942U6_ORYSA/31-78 IICKARSKMY.RGKCRGNRN-.CAMICVH..EEYT...GGYCS-K.GVFSK.CMCTKRC
Q39999_HORVU/35-82 RICTGKSQHH.HFPCFSDKS-.CARNCVS..EHGAhwtAGYCH--.--LRR.CTCQREC
THZ2_MAIZE/1-47 RVCMGKSQHH.SFPCISDRL-.CSNECVK..EDGGw.tAGYCH--.--LRY.CRCQKAC
Q9FPM3_MEDSA/28-72 RTCENLADKY.RGPCFS--G-.CDTHCTT..KENA..vSGRCR--.-DDFR.CWCTKRC
D230_PEA/28-72 NTCENLAGSY.KGVCF--GG-.CDRHCRT..QEGA..iSGRCR--.-DDFR.CWCTKNC
PSD2_PEA/1-47 KTCENLSGTF.KGPCIPDGN-.CNKHCRN..NEHL..lSGRCR--.-DDFR.CWCTNRC
10KD_VIGUN/29-75 KTCENLVDTY.RGPCFTTGS-.CDDHCKN..KEHL..lSGRCR--.-DDVR.CWCTRNC
DR39_PEA/29-74 NTCEHLADTY.RGVCFTNAS-.CDDHCKN..KAHL..iSGTCH--.--DWK.CFCTQNC
Q9VZQ5_DROME/23-69 SHADCLSGRY.RGSCAVWHRKkCVDICQR..EGRT...SGHCS--.-PSLK.CWCEG-C
DMYC_DROME/25-70 DA-DCLSGRY.KGPCAVWDNEtCRRVCKE..EGRS...SGHCS--.-PSLK.CWCEG-C
Q8IRD7_DROME/25-71 LARDCLSGTF.GGPCWAWSGEkCRRLCIE..EGHV...SGHCS--.-GAMK.CWCEG-C
Q8IRD6_DROME/26-71 AV-DCPSGRF.SGPCWAWDGEqCRRLCRE..EGRV...SGHCS--.-ASLK.CWCEQ-C
Q9FZ31_ARATH/30-80 ELCKRESETW.SGRCVNDYQ-.CRDHCIN..NDRG..nDGYCAGG.YPWYRsCFCFFSC
LCR78_ARATH/29-78 RICERRSKTW.TGFCGNTRG-.CDSQCKR..WERA..sHGACHAQ.FPGFA.CFCYFNC
Q8LSM8_HELAN/29-78 ELCEKASQTW.SGTCGKTKH-.CDDQCKS..WEGA..aHGACHVR.DGKHM.CFCYFNC
ASF1_HELAN/16-65 KICEKPSKTW.FGNCKDTDK-.CDKRCID..WEGA..kHGACHQR.EAKHM.CFCYFDC
AF2B_SINAL/2-52 KLCARPSGTWsSGNCRNNNA-.CRNFCIK..LEKS..rHGSCNIP.FPSNK.CICYFPC
AFP4_RAPSA/31-80 KLCERSSGTW.SGVCGNNNA-.CKNQCIN..LEGA..rHGSCNYI.FPYHR.CICYFPC
Q40539_TOBAC/32-82 KLCRRKSKTF.SGYCFISEH-.CDEECKE..KEGA..kRGMCIKKsIFRRY.CYCYHKC