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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00304 phylogeny
for nucleotide alignment


 
(((DEF1_CAPAN/28-74,((((Q9FQ14_CITPA/27-73,SRP_SOYBN/29-74),P322_SOLTU/28-74),LCR74_ARATH/27-73),(((((O24225_ORYSA/34-80,Q39999_HORVU/35-82),Q8L698_WHEAT/34-82),Q93WS9_MUSAC/3-49),THGF_HELAN/32-78),((THG_PETIN/32-78,DEF2_CAPAN/28-74),(Q8LEG6_ARATH/30-76,(LCR70_ARATH/31-77,Q39403_BRACM/31-77)))))),(((Q948T4_PYRPY/41-87,Q948T2_PYRPY/35-81),(((O24105_9SOLA/26-72,O24104_9SOLA/8-54),(Q40128_LYCES/27-73,Q9XHE3_CAPCH/28-75)),(DEF1_PETHY/26-72,DEF2_PETHY/26-74))),(((((Q9FPM3_MEDSA/28-72,D230_PEA/28-72),DR39_PEA/29-74),10KD_VIGUN/29-75),((Q9VZQ5_DROME/23-69,DMYC_DROME/25-70),(Q8IRD7_DROME/25-71,Q8IRD6_DROME/26-71))),((LCR78_ARATH/29-78,((Q9FZ31_ARATH/30-80,AFP4_RAPSA/31-80),(Q8LSM8_HELAN/29-78,ASF1_HELAN/16-65))),Q40539_TOBAC/32-82)))),Q40779_PICAB/34-82,LCR72_ARATH/29-73);
(((DEF1_CAPAN/28-74:0.27533,((((Q9FQ14_CITPA/27-73:0.10654,SRP_SOYBN/29-74:0.21576):0.11375,P322_SOLTU/28-74:0.20428):0.10136,LCR74_ARATH/27-73:0.21979):0.06511,(((((O24225_ORYSA/34-80:0.07074,Q39999_HORVU/35-82:0.51220):0.06972,Q8L698_WHEAT/34-82:0.22978):0.02190,Q93WS9_MUSAC/3-49:0.14613):0.09910,THGF_HELAN/32-78:0.14667):0.00752,((THG_PETIN/32-78:0.15402,DEF2_CAPAN/28-74:0.10794):0.06510,(Q8LEG6_ARATH/30-76:0.21940,(LCR70_ARATH/31-77:0.08532,Q39403_BRACM/31-77:0.10717):0.08585):0.07541):0.06335):0.03582):0.08573):0.00000,(((Q948T4_PYRPY/41-87:0.07993,Q948T2_PYRPY/35-81:0.26672):0.14982,(((O24105_9SOLA/26-72:0.03948,O24104_9SOLA/8-54:0.11196):0.02943,(Q40128_LYCES/27-73:0.06790,Q9XHE3_CAPCH/28-75:0.21931):0.11275):0.15851,(DEF1_PETHY/26-72:0.19063,DEF2_PETHY/26-74:0.03885):0.17322):0.39105):0.08313,(((((Q9FPM3_MEDSA/28-72:0.15601,D230_PEA/28-72:0.12434):0.11158,DR39_PEA/29-74:0.15144):0.10915,10KD_VIGUN/29-75:0.05623):0.18440,((Q9VZQ5_DROME/23-69:0.27478,DMYC_DROME/25-70:0.04694):0.06173,(Q8IRD7_DROME/25-71:0.17791,Q8IRD6_DROME/26-71:0.05120):0.16946):0.41088):0.14603,((LCR78_ARATH/29-78:0.24097,((Q9FZ31_ARATH/30-80:0.33009,AFP4_RAPSA/31-80:0.15741):0.20294,(Q8LSM8_HELAN/29-78:0.13756,ASF1_HELAN/16-65:0.26205):0.14877):0.02001):0.26791,Q40539_TOBAC/32-82:0.42263):0.25914):0.22270):0.10379):0.10402,Q40779_PICAB/34-82:0.33690,LCR72_ARATH/29-73:0.29701);