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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00301 - Rubredoxin) |
| Rubredoxin |
| (Pfam reference: accession no. PF00301) |
| (Interpro reference: accession no. IPR004039) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
43 sequences @ 54 aa (ave. pairwise identity: 0.48) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 16.33) |
| nucleotides (available for above) |
33 sequences @ 162 bp (ave. pairwise identity: 0.51) |
New Hampshire format (total tree length: 10.74) |
|
amino acids, restricted set (corresp. to available nt seqs) |
33 sequences @ 54 aa (ave. pairwise identity: 0.45) |
New Hampshire format (total tree length: 13.20) |