EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF00298 - Ribosomal_L11)
Ribosomal protein L11, RNA binding domain
(
Pfam
reference: accession no.
PF00298
)
(
Interpro
reference: accession no.
IPR000911
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 71 aa
(ave. pairwise identity: 0.40)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 7.17)
nucleotides
(available for above)
13 sequences @ 213 bp
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 5.67)
amino acids, restricted set
(corresp. to available nt seqs)
13 sequences @ 71 aa
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 7.17)