EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00270 - DEAD)
DEAD/DEAH box helicase
(Pfam reference: accession no. PF00270)
(Interpro reference: accession no. IPR011545)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
201 sequences @ 548 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 127.38)
nucleotides
(available for above)
198 sequences @ 1644 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 96.95)
amino acids, restricted set
(corresp. to available nt seqs)
198 sequences @ 548 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 125.66)