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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00267 - Porin_1) |
| Gram-negative porin |
| (Pfam reference: accession no. PF00267) |
| (Interpro reference: accession no. IPR001702) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
18 sequences @ 423 aa (ave. pairwise identity: 0.46) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 7.27) |
| nucleotides (available for above) |
15 sequences @ 1269 bp (ave. pairwise identity: 0.52) |
New Hampshire format (total tree length: 4.72) |
|
amino acids, restricted set (corresp. to available nt seqs) |
15 sequences @ 423 aa (ave. pairwise identity: 0.43) |
New Hampshire format (total tree length: 6.75) |