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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF00258 phylogeny |
| (((((((((((((O59761_SCHPO/93-242,YP07_YEAST/207-355),(((MIOC_ECOLI/5-137,MIOC_HAEIN/5-137),(YQCA_SHIFL/6-140,YQCA_ERWCA/6-140)),((((((YJ9F_YEAST/684-826,(((((NCPR_SCHPO/55-203,NCPR_ASPNG/68-215),(NCPR_YEAST/62-198,NCPR_CANTR/62-199)),((Q09590_CAEEL/75-212,P91655_DROMT/87-224),NCPR_HUMAN/81-218)),((O48937_PETCR/76-219,O24425_ESCCA/97-240),Q43235_VICSA/85-229)),(((CPXB_BACME/484-616,CYPD_BACSU/495-627),CYPE_BACSU/488-620),C505_FUSOX/502-636))),(O94613_SCHPO/8-119,((Q9UHB4_HUMAN/8-145,(Q9U2Y8_CAEEL/5-142,Q9VSJ5_DROME/5-142)),Q9SRU4_ARATH/10-141))),(MTRR_CAEEL/6-142,MTRR_HUMAN/33-169)),(((NOS1_RABIT/763-936,NOS3_HUMAN/521-697),((O77104_MANSE/521-715,(NOS_RHOPR/507-688,(NOS_ANOST/569-761,NOS_DROME/673-863))),NOS_LYMST/429-605)),((NS2A_HUMAN/541-672,NOS2_CHICK/538-669),(NOS2_ONCMY/171-302,Q9PU92_CYPCA/538-669)))),O68591_PSEAE/357-487),((CYSJ_ECOLI/65-196,O32214_BACSU/70-201),CYSJ_THIRO/62-193)))),((((FLAV_TREPA/6-140,(FLAV_MEGEL/4-130,FLAV_CLOBE/3-131)),O26935_METTH/12-130),((FLAW_ECOLI/5-160,((FLAV_HELPJ/6-155,(FLAV_KLEPN/6-160,FLAV_HAEIN/5-159)),((FLAW_KLEPN/5-166,FLAV_ENTAG/6-168),(FLAV_AZOCH/5-167,FLAV_RHOCA/5-167)))),((FLAV_SYNP2/5-159,(FLAV_ANASP/6-159,FLAV_SYNP7/5-159)),FLAV_SYNY3/6-160))),((FLAV_CLOSA/5-148,(FLAW_BACSU/6-139,FLAV_BACSU/6-139)),(FLAV_DESDE/6-140,((FLAV_DESGI/6-138,FLAW_DESGI/6-138),(FLAV_DESSA/6-138,(FLAV_DESVH/6-140,FLAV_DESVM/6-140))))))),((((Y534_METJA/249-383,Y732_METJA/252-385),((O28752_ARCFU/352-483,(O26322_METTH/265-400,FPRA_METTM/261-395)),O30070_ARCFU/196-327)),(O58812_PYRHO/269-403,Q9WZL4_THEMA/258-390)),(NORV_ECOLI/256-389,(FPRA_RHOCA/278-411,DFA3_SYNY3/285-417)))),FLAV_AQUAE/6-155),YHCB_BACSU/5-116),O29904_ARCFU/6-141),Q9RYU4_DEIRA/9-144),WRBA_ECOLI/5-134),WRBA_ZYMMO/6-135),((ALA7_ALTAL/7-139,CLH5_CLAHE/7-139),(P25_SCHPO/9-139,(Q9Y763_PHACH/6-136,(PST2_YEAST/6-135,YCP4_YEAST/6-137))))),O23207_ARATH/77-209),O23807_LITER/7-138,Q9XH74_PRUAR/7-138); |
| (((((((((((((O59761_SCHPO/93-242:0.30754,YP07_YEAST/207-355:0.45384):1.21579,(((MIOC_ECOLI/5-137:0.40652,MIOC_HAEIN/5-137:0.29617):0.33575,(YQCA_SHIFL/6-140:0.19581,YQCA_ERWCA/6-140:0.30118):0.57532):0.36269,((((((YJ9F_YEAST/684-826:0.68150,(((((NCPR_SCHPO/55-203:0.44027,NCPR_ASPNG/68-215:0.22805):0.11243,(NCPR_YEAST/62-198:0.48818,NCPR_CANTR/62-199:0.28933):0.15329):0.09566,((Q09590_CAEEL/75-212:0.36857,P91655_DROMT/87-224:0.20623):0.03941,NCPR_HUMAN/81-218:0.17309):0.21255):0.18667,((O48937_PETCR/76-219:0.15036,O24425_ESCCA/97-240:0.09445):0.06046,Q43235_VICSA/85-229:0.08719):0.35326):0.13593,(((CPXB_BACME/484-616:0.38346,CYPD_BACSU/495-627:0.23665):0.16540,CYPE_BACSU/488-620:0.18858):0.33105,C505_FUSOX/502-636:0.48375):0.48446):0.18142):0.21056,(O94613_SCHPO/8-119:0.74663,((Q9UHB4_HUMAN/8-145:0.35902,(Q9U2Y8_CAEEL/5-142:0.37051,Q9VSJ5_DROME/5-142:0.38271):0.08516):0.10737,Q9SRU4_ARATH/10-141:0.38006):0.01324):0.17823):0.10973,(MTRR_CAEEL/6-142:0.52183,MTRR_HUMAN/33-169:0.49884):0.31891):0.08580,(((NOS1_RABIT/763-936:0.18367,NOS3_HUMAN/521-697:0.24444):0.07036,((O77104_MANSE/521-715:0.27827,(NOS_RHOPR/507-688:0.22807,(NOS_ANOST/569-761:0.05309,NOS_DROME/673-863:0.10458):0.08552):0.07830):0.15368,NOS_LYMST/429-605:0.46935):0.08751):0.13864,((NS2A_HUMAN/541-672:0.25256,NOS2_CHICK/538-669:0.13120):0.11089,(NOS2_ONCMY/171-302:0.10575,Q9PU92_CYPCA/538-669:0.18941):0.15926):0.17393):0.59072):0.12569,O68591_PSEAE/357-487:0.78775):0.13748,((CYSJ_ECOLI/65-196:0.53837,O32214_BACSU/70-201:0.26425):0.14031,CYSJ_THIRO/62-193:0.39314):0.13148):0.13346):0.06999):0.44298,((((FLAV_TREPA/6-140:0.55166,(FLAV_MEGEL/4-130:0.51222,FLAV_CLOBE/3-131:0.36108):0.11690):0.30982,O26935_METTH/12-130:1.61959):0.31562,((FLAW_ECOLI/5-160:0.59919,((FLAV_HELPJ/6-155:0.54260,(FLAV_KLEPN/6-160:0.06240,FLAV_HAEIN/5-159:0.16576):0.24704):0.09580,((FLAW_KLEPN/5-166:0.20311,FLAV_ENTAG/6-168:0.29481):0.23558,(FLAV_AZOCH/5-167:0.20847,FLAV_RHOCA/5-167:0.25948):0.08751):0.24669):0.07981):0.13442,((FLAV_SYNP2/5-159:0.27910,(FLAV_ANASP/6-159:0.20427,FLAV_SYNP7/5-159:0.16657):0.02323):0.05293,FLAV_SYNY3/6-160:0.10085):0.15479):0.66266):0.13655,((FLAV_CLOSA/5-148:2.07178,(FLAW_BACSU/6-139:0.35656,FLAV_BACSU/6-139:0.62513):0.01003):0.22709,(FLAV_DESDE/6-140:0.48685,((FLAV_DESGI/6-138:0.24715,FLAW_DESGI/6-138:0.23576):0.04451,(FLAV_DESSA/6-138:0.26355,(FLAV_DESVH/6-140:0.15628,FLAV_DESVM/6-140:0.26354):0.20792):0.06497):0.14255):0.27003):0.02142):0.32203):0.45064,((((Y534_METJA/249-383:0.26930,Y732_METJA/252-385:0.19816):0.32830,((O28752_ARCFU/352-483:0.36393,(O26322_METTH/265-400:0.35273,FPRA_METTM/261-395:0.25390):0.27679):0.11677,O30070_ARCFU/196-327:0.87512):0.09093):0.05393,(O58812_PYRHO/269-403:0.29112,Q9WZL4_THEMA/258-390:0.35934):1.12338):0.11615,(NORV_ECOLI/256-389:0.49086,(FPRA_RHOCA/278-411:0.74887,DFA3_SYNY3/285-417:0.81060):0.22604):0.14792):0.76371):0.43383,FLAV_AQUAE/6-155:1.43053):0.95860,YHCB_BACSU/5-116:0.64204):0.33454,O29904_ARCFU/6-141:0.32863):0.07173,Q9RYU4_DEIRA/9-144:0.91293):0.08772,WRBA_ECOLI/5-134:0.31411):0.05147,WRBA_ZYMMO/6-135:0.31228):0.40096,((ALA7_ALTAL/7-139:0.17870,CLH5_CLAHE/7-139:0.26500):0.08956,(P25_SCHPO/9-139:0.26801,(Q9Y763_PHACH/6-136:0.13038,(PST2_YEAST/6-135:0.17083,YCP4_YEAST/6-137:0.29129):0.11277):0.07494):0.09028):0.05507):0.21168,O23207_ARATH/77-209:0.22982):0.11721,O23807_LITER/7-138:0.12025,Q9XH74_PRUAR/7-138:0.12747); |