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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00240 - ubiquitin)
Ubiquitin family
(Pfam reference: accession no. PF00240)
(Interpro reference: accession no. IPR000626)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
93 sequences @ 89 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 66.45)
nucleotides
(available for above)
85 sequences @ 267 bp
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 40.28)
amino acids, restricted set
(corresp. to available nt seqs)
85 sequences @ 89 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 61.43)