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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00231 alignment
(18 sequences with 343 aa)


ATPG_YEAST/34-310 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNLDVE........-------ATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLND----Q.PNADIVTIGDKIKMQLL.RTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKA......GTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIE-----.-.-----QSPSFG-------------.-.-.-.------KFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASSL
ATPG_BOVIN/26-297 ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIK-----........--------TPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAG.KEVKIIGVGDKIRSILH.RTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSG--......YEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-----.-.-----SAESMS-------------.-.-.-.-------IYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL
ATPG_RHORU/2-299 ASLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAASTAGM-........AGASPLLGGTGKDNVHLIVALTANRGLCGGFNGSIIRATRTLVRELEAQG.KTVKLLCIGKKGRDGLK.REFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQA......GEFDVCTLVYNRFQSAISQVVTRQQIIPFAVPTTVAAG.-.------NDNDRTAGP---------.-.-.-.---KAIYEYEPSEEEILADLLPKNVAIQVFRGMLESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKELIEIISGAEAI
ATPG_RHOBL/2-286 PSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQDSAEAARPYAERMGAVIASLASGQG---........AGAPRLLAGNGRDQIHLLVVMTSERGLCGGFNSTIVRLARQRANELVAQG.KTVKILTVGKKGREQLK.RDWASAFVGHVDLSDVRRLGYSNAQGIAREVLAAFEA......GEADVVTIFYNRFQSVISQVPTAQQVIPAKFEAAETN-.-.------------------------.-.-.-.----ALYDYEPSEEAILADLLPRGVATQIFTALLENAASEQGARMSAMDNATRNAGDMINKLTIQYNRSRQAAITKELIEIISGAEAL
ATPG3_IPOBA/46-324 ISTQVVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPS------........----------VDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPE.KENKYVILGEKAKAQLV.RDSKKDIELIITELQKNPLNYTQVSVVADDILKN---......VEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVE-----.-.-----RESESGGKLGDLD------.-.-.-.---SYEIEGAESKSEVLQNLTEFQFSSVLFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL
ATPG_THIFE/2-288 ANAKEIRGQIKSVKNTRKITRAMEMVAASKMRRAQERMRAARPCAEKIREVLGHLAQAHPEYE........---HPLMQVR-PVKKAGFLVVTTDRGLCGGLNVNVLRNVVQKMRELHEEG.VESNLAVVGNKGLGFLR.RHG-AHLVADVNGLG-DSPHLGDMIGPIRAMADAYAK......GEVDVVYLVSSRFVNTMLQRATVEQLLPVEKP------.-.------TASAEQRAE---------.-.-.-.---LWDYIYEPEARPVLDRLMQRYVESVVYQAVIEHLACEQSARMVAMKSASDNAKRMVDDLQLAYNKARQAAITQEIAEISAGAARF
ATPG_HAEIN/2-289 AGAKEIKTKIASVQSTQKITKAMEMVATSKMRKTQDRMAASRPYSETIRNVISHVSKASIGYK........---HPFLVER-EVKKIGILVISTDRGMCGGLNVNLFKTTLNQIKNWKEQN.ISTDLGLIGSKGISFFR.SFG-FNIKGQLSGLG-DTPALEELIGVANTMFDAYRN......GEIDAVYIAYNKFVNTMSQKPVVQQLVPLPESK-----.-.------DDHLNERQQ---------.-.-.-.---TWDYLYEPEPKVLLDSLLVRYLESQIYQAVVDNVASEQAARMVAMKAATDNAGNLINDLRLVYNKARQASITNELNEIVAGAAAI
ATPG_ECOLI/2-287 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYK........---HPYLEDR-DVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKG.VQCDLAMIGSKGVSFFN.SVG-GNVVAQVTGMG-DNPSLSELIGPVKVMLQAYDE......GRLDKLYIVSNKFINTMSQVPTISQLLPLPAS------.-.------D-DDDLKHK---------.-.-.-.---SWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV
ATPG_PROMO/1-281 AAGKEIKSRISSVQSTRQITKAMEIVSSTKFKKFQALVNQSKPYSGSMDKVLANLAAGIKNER........---HPLFDGKTEVKRIGIIVMTSDRGLCGGFNSSTLKEMEKLIVANPDKE.--VSVIAIGKKGRDYCK.KKD-RDLKAEYIQLI-PETMFDKAKEISENIVEYFYE......DIFDEVYLIYNEFISALSTELIVKKLLPIERIE-----.-.------VQ--D-------------.-.-.-.---NTTYIFEPSVEDILSSLLPKYLNIQLYQAILENTASEHSARKNAMKNATDNAEDMIKDLTLQYNRERQAAITQEISEIVSGASAL
ATPG_ENTHR/3-299 ASLNEIKTRIASTKKTSQITRAMQMVSASKLTKSEASSQKFQIYANKVREIVTHLTATQLNDIasdnprgdINYNSMLISR-PVKKTGYIVITADGGLVGGYNSSILKQTMSILEEDHKSP.DDYVMIAIGGTGADFFK.ARG-INLAYELRNLS-DQPSFDEVRKIVGMATTMYQN......EVFDELYVCYNHHINSLTSQFRVEKMLPISDLD-----.-.------PEE-ATTF----------.-.-.-.---DQEYIFEPSKEEILAQLLPQYAESLIYGAIVDAKTAEHAAGMTAMKTATDNAATIIDDLTVSYNRARQGAITQEITEIVAGASAL
ATPG_BACME/2-284 ASLRDIQTRITSTKKTSQITKAMEMVSAAKLNRAEQNAKSFVPYMEKIQEVVSSVALGSRGAS........---HPMLTAR-SVKKTGYIVITSDRGLAGAYNSNILRKVSQAIEERHQSP.DEYGVIAIGRVGRDFFV.KRG-IPVLLEITGLA-DQPAFADIQGIASQTVQMFAD......GTFDELYLYYNHFINTISQEVTEKKLLPLTDLQ-----.-.------PS--G--K----------.-.-.-.---LVGYEFEPSQEEILEVLLPQYAESLIYGGLLDGKASEHAARMTAMKSATDNAKDLINNLTLSYNRARQAAITQEITEIVGGAAAL
ATPG_BACCA/5-286 ASLRDIKTRINATKKTSQITKAMEMVSTSKLNRAEK-REIVRPYMEKIQEVVAMSASAARS--........---HPMLVSR-PVKKTGYLVITSDRGLAGAYNSNVVRLVYPKRSKNAMLPpDEIAIIVIGRVGLSFFR.KRN-MPVILDITRLP-DQPSFADIKEIARKTVGLFAD......GTFDELYMYYNHYVSAIQQEVTERKLLPLTDFL-----.-.------AE--N-KQ----------.-.-.-.---RTVYEFEPSQEEILDVLLPQYAESLIYGALLDAKASEHAARMTAMKNATDNANDVIRTLTLSYNRARQAAITQEITEIVAGRNAL
ATPG_BACPF/2-288 ASLRDIQGRITSTKKTKQITKAMQMVSAAKLNRAQHNAQSFTPYTDKIREVVAAIASSGTEIS........---HPMLEER-PVKKTGYIVVTSDKGLAGGYNSSLIRSLLNTIKERHNSP.DEYGIIIMGRIGRDLFK.KRG-LPIIQEVIGLP-DQPEFNDIKNIARTSVEMFAD......GIFDELYVWYNHFVSPITQDVTEMKLLPLTDIG-----.-.-----SDE--KATSA---------.-.-.-.---SASYEYEPNEQAILEKLLPQYAESLIYGSLLDAKASEFGARMTAMSAATDNASALIEELTLKFNRARQAAITQEITEIVGGAAAL
ATPG_CHLRE/35-356 AGLKEVRDRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQED........-VDSPLCAVR-PVKSVLLVVLTGDRGLCGGYNNFIIKKTEARYRELTAMG.VKVNLVCVGRKGAQYFA.RRKQYNIVKSFSLG--AAPSTKEAQGIADEIFASFIA......QESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVdGkCVDAADDEIFKLTTKGGEFAVEREkTtIeT.EALDPSLIFEQEPAQILDALLPLYMSSCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAAT
ATPG1_ARATH/51-372 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDD........-VDVPLTKVR-PVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLG.LEYTVISVGKKGNSYFL.RRPYIPVDKYLEAG--TLPTAKEAQAVADDVFSLFIS......EEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDInGtCVDAAEDEFFRLTTKEGKLTVEREtFrTpT.ADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANAQ
ATPG_ANASP/2-314 PNLKSIRDRIQSVKNTKKITEAMRLVAAARVRRAQEQVIATRPFADRLAQVLYGLQTRLRFED........-VDLPLLKKR-EVKSVGLLVISGDRGLCGGYNTNVIRRAENRAKELKAEG.LDYTFVIVGRKAEQYFR.RRE-QPIDASYTGLE-QIPTADEANKIADELLSLFLS......EKVDRIELVYTRFVSLVSSRPVIQTLLPLDTQG-----.-.-LEAADDEIFRLTTRGGQFQVERQ.TvTsQaRPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELIKSLSLSYNKARQAAITQELLEVVGGAEAL
ATPG_MYCLE/3-294 ATLRELRGRIRSVGSIKKITKAQELIATSRIARAQVRLESARPYAVDITRMLTTLAYEAVLD-........---HPLLVASATPKRAGVLVVSSDRGLCGAYNANVFRRSEELFSLLRAEG.KTPILYVVGRKALNYYT.FRN-WGIAESWTGFS-EQPKYENAAKIASTLVDVFMLgssesdAGVDELHIVFTEFKSMLSQSTKARRMAPMVVEYVE---.-.-----ESKLPR-------------.-.-.-.----TLYSFEPDATTLFEALLPRYLTIRVYAAMLESAASELASRQRAMKSATDNADDLIKALTLEANRERQAQITQEISEIVGGANAL
ATPG_MYCGA/2-288 ASMQDLKRRMESITVTHKITKAMKMLSTVKLNRFKATLGKTKEFYQEFYEVIGAVITNYNKTK........---PRTTTPTNQSTKRLWIVINTQLGLCGSYNTNVGKLLVSELAK--DDE.----IILVGTKLNSFLRtRNHEDQIIHTYSIND-KNIDFESSYMIGKHVLELHEK......NQYDSIDCVYTNYINSLNFEAKKIQLIPADPS-IFQA-.-.------DTLDR-------------.-.I.N.DKFPKNISFEPGVDVIIPALEKQLLQVILYGCLIESKVCEYASRRNAMDTAAKNADDLYNKYKLLYNQLRQAKITQEINEIVAGAA--