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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00229 - TNF)
TNF(Tumour Necrosis Factor) family
(Pfam reference: accession no. PF00229)
(Interpro reference: accession no. IPR006052)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
52 sequences @ 171 aa
(ave. pairwise identity: 0.26)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 34.16)
nucleotides
(available for above)
52 sequences @ 513 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 21.74)
amino acids, restricted set
(corresp. to available nt seqs)
52 sequences @ 171 aa
(ave. pairwise identity: 0.26)
New Hampshire format
(total tree length: 34.16)