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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00216 phylogeny
for amino acid alignment


 
((((((((((((DBH_RHIME/1-90,Q982V3_RHILO/1-90),((((DBH_RICPR/1-99,((DBH_ANASP/1-90,DBH_SYNY3/1-96),DBH_GUITH/1-90)),Q97EA3_CLOAB/1-90),((((TF1_BPSP1/1-90,DBH1_STRCO/1-91),DBHA_BURPS/1-90),(DBH_CAUCR/2-91,(DBH_DEIRA/34-122,Q97CE1_THEVO/2-90))),(((((DBHB_NEIMB/1-89,DBHC_NEIMA/1-90),Q9R336_BORBR/1-90),(DBHB_VIBCH/1-90,(DBHB_PSEAE/1-90,DBHB_SERMA/1-90))),(DBH_XYLFA/1-90,DBHA_PSEAE/1-90)),(((DBHA_SALTY/1-90,DBH_BUCAI/1-90),DBHA_VIBCH/1-90),DBH_PASMU/1-90)))),(DBH2_BPSPC/1-90,(DBH1_BACSU/1-90,(DBH1_BACHD/1-90,((Q99U17_STAAM/1-90,(DBH2_BACHD/1-90,(DBH_STRTR/2-91,(DBH_LACLA/2-91,Q9CH59_LACLA/2-91)))),O85384_LISMO/2-83)))))),((DBH_HELPY/1-91,DBH_CAMJE/1-90),(DBH2_STRCO/1-89,DBH_MYCBO/1-90))),(DBH_THEMA/1-90,DBH_THETH/6-95)),((DBH_BORAF/9-104,O67923_AQUAE/1-90),(((IHFB_RHOSH/1-91,IHFB_CAUCR/1-91),(IHFB_AGRTU/1-91,IHFB_RHILO/1-91)),((((IHFB_PSEAE/1-91,IHFB_XYLFA/1-91),((IHFB_ERWCH/1-91,IHFB_VIBCH/1-91),(IHFB_PASHA/1-91,(IHFB_PASMU/1-91,IHFB_HAEIN/1-91)))),IHFB_BUCAI/1-91),IHFB_NEIMA/1-96)))),((DBH_CHLTR/4-94,DBH_TREPA/6-95),((IHFA_BUCAI/3-92,(((IHFA_ECOLI/3-92,IHFA_XYLFA/3-92),IHFA_NEIGO/3-93),((IHFA_HAEIN/4-93,IHFA_PASMU/3-92),IHFA_PASHA/4-93))),(IHFA_MYXXA/1-90,(((IHFA_RHOCA/5-94,IHFA_RHILO/6-95),IHFA_ZYMMO/8-97),Q9A8I3_CAUCR/6-95))))),(Q49060_MYCCA/1-89,(((Q9ZHZ9_MYCHY/7-96,Q9ZCL7_RICPR/3-91),Q98RC2_MYCPU/36-125),DBH_AQUAE/1-94))),(Q44357_9RHIZ/1-91,Q9A5W6_CAUCR/1-91)),(Q49504_MYCGA/7-96,DBH_UREPA/8-97)),Q9HX76_PSEAE/3-92),HLIK_ASFM2/9-101),P94344_BORPE/48-142,Q9PC42_XYLFA/33-127);
((((((((((((DBH_RHIME/1-90:0.10909,Q982V3_RHILO/1-90:0.14247):0.32765,((((DBH_RICPR/1-99:0.64486,((DBH_ANASP/1-90:0.07066,DBH_SYNY3/1-96:0.27089):0.12233,DBH_GUITH/1-90:0.48974):0.18170):0.14880,Q97EA3_CLOAB/1-90:0.38058):0.06752,((((TF1_BPSP1/1-90:0.65722,DBH1_STRCO/1-91:0.39995):0.30876,DBHA_BURPS/1-90:0.34421):0.06237,(DBH_CAUCR/2-91:0.46377,(DBH_DEIRA/34-122:0.59499,Q97CE1_THEVO/2-90:1.07053):0.13952):0.10635):0.07299,(((((DBHB_NEIMB/1-89:0.04734,DBHC_NEIMA/1-90:0.35026):0.20886,Q9R336_BORBR/1-90:0.18287):0.07848,(DBHB_VIBCH/1-90:0.23027,(DBHB_PSEAE/1-90:0.08701,DBHB_SERMA/1-90:0.15447):0.04644):0.03257):0.09256,(DBH_XYLFA/1-90:0.28156,DBHA_PSEAE/1-90:0.35046):0.05183):0.06261,(((DBHA_SALTY/1-90:0.05198,DBH_BUCAI/1-90:0.34471):0.06919,DBHA_VIBCH/1-90:0.14424):0.06877,DBH_PASMU/1-90:0.15413):0.11969):0.05296):0.06457):0.05662,(DBH2_BPSPC/1-90:0.31508,(DBH1_BACSU/1-90:0.12117,(DBH1_BACHD/1-90:0.10009,((Q99U17_STAAM/1-90:0.07429,(DBH2_BACHD/1-90:0.22703,(DBH_STRTR/2-91:0.08885,(DBH_LACLA/2-91:0.14288,Q9CH59_LACLA/2-91:0.73427):0.06392):0.12502):0.05434):0.03370,O85384_LISMO/2-83:0.33596):0.06719):0.02904):0.07260):0.00000):0.02415):0.02171,((DBH_HELPY/1-91:0.71464,DBH_CAMJE/1-90:0.22620):0.16055,(DBH2_STRCO/1-89:0.40192,DBH_MYCBO/1-90:0.23924):0.37957):0.17497):0.08621,(DBH_THEMA/1-90:0.23410,DBH_THETH/6-95:0.42125):0.12320):0.07649,((DBH_BORAF/9-104:0.63096,O67923_AQUAE/1-90:0.83339):0.20590,(((IHFB_RHOSH/1-91:0.16286,IHFB_CAUCR/1-91:0.28601):0.05552,(IHFB_AGRTU/1-91:0.44168,IHFB_RHILO/1-91:0.11844):0.09026):0.13947,((((IHFB_PSEAE/1-91:0.11845,IHFB_XYLFA/1-91:0.29232):0.05490,((IHFB_ERWCH/1-91:0.07087,IHFB_VIBCH/1-91:0.16994):0.08223,(IHFB_PASHA/1-91:0.23337,(IHFB_PASMU/1-91:0.15633,IHFB_HAEIN/1-91:0.24960):0.01849):0.17142):0.00747):0.06202,IHFB_BUCAI/1-91:0.33487):0.13734,IHFB_NEIMA/1-96:0.28822):0.29257):0.19142):0.19330):0.03886,((DBH_CHLTR/4-94:0.71814,DBH_TREPA/6-95:0.62879):0.19299,((IHFA_BUCAI/3-92:0.28000,(((IHFA_ECOLI/3-92:0.05578,IHFA_XYLFA/3-92:0.31937):0.04045,IHFA_NEIGO/3-93:0.33280):0.04739,((IHFA_HAEIN/4-93:0.25747,IHFA_PASMU/3-92:0.06176):0.11763,IHFA_PASHA/4-93:0.17256):0.11115):0.10510):0.28186,(IHFA_MYXXA/1-90:0.17449,(((IHFA_RHOCA/5-94:0.20675,IHFA_RHILO/6-95:0.24430):0.07554,IHFA_ZYMMO/8-97:0.37183):0.10554,Q9A8I3_CAUCR/6-95:0.31702):0.26114):0.09804):0.29315):0.11507):0.06654,(Q49060_MYCCA/1-89:1.00932,(((Q9ZHZ9_MYCHY/7-96:0.72068,Q9ZCL7_RICPR/3-91:0.91906):0.18507,Q98RC2_MYCPU/36-125:0.64560):0.09406,DBH_AQUAE/1-94:0.87644):0.05683):0.08744):0.11143,(Q44357_9RHIZ/1-91:0.45944,Q9A5W6_CAUCR/1-91:0.12325):0.45700):0.14410,(Q49504_MYCGA/7-96:0.82291,DBH_UREPA/8-97:0.80989):0.14426):0.07776,Q9HX76_PSEAE/3-92:0.35129):0.64926,HLIK_ASFM2/9-101:0.78178):0.58677,P94344_BORPE/48-142:0.37501,Q9PC42_XYLFA/33-127:0.19683);