PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF00206 alignment |
| ARLY_CANAL/17-312 | GRFTGATDPLMDLYNASLPYDKVMYDADLT-------GTKVYTQGLNKLGLIT-.--TEELNLIHQGLEQIRQEWHDN-KFIIKAGDEDIHTANERRLGEIIGK----------------NISGKVHTGRSRNDQVATDMRIFVRESLLN-LSKILHQFITAILERAHKEIDVLMPGYTHLQKAQPIRWAHWLSSYATYFTEDYK-RLQEIITRVNQSPLGSGALAGHPYGIDR-E---FLAKGLG---FDG----VIGNSLTAVSDRDFVVESLFWSTLFMNHISRF-SEDLIIYSSGE-FGFIKLADAYST-..GSSLMPQKKNPDSLEL---LRGKSGRVFG |
| ARLY_SCHPO/12-306 | GRFSGATDPLMAEFNKSIYSGKEMCEEDVI-------GSMAYAKALCQKNVIS-.--EEELNSILKGLEQIQREWNSG-QFVLEPSDEDVHTANERRLTEIIG-----------------DVAGKLHTGRSRNDQVTTDLRLWLCRKIKE-VEVYVINLLKVFTNRAEMEIDVIMSGYTHLQRAQPVRWSHFLMSHALPLLGDLG-RLRQLYTRVSQLPLGAGALAGNPFNVDR-E---FLRKELG---FEG----IIMNSMNAVGDRDFVIEFMFWAGMVMLHISRF-AEDLIIYSSSE-FGFVTLSDAYST-..GSSIMPQKKNPDSLEL---LRGKSGRVLG |
| ARLY_CHLRE/18-313 | GRFTGKTDPLMEKFNESLPFDKRLWAEDIK-------GSQAYAKALAKAGILA-.--HDEAVTIVEGLAKVAEEWKAG-AFVIKAGDEDIHTANERRLTELVG-----------------AVGGKLHTGRSRNDQVATDYRLWLVGQVEV-MRSEVGELMRVAADRSEAEVEVLMPGFTHLQNAMTVRWSHWLMSHAAAWQRDDM-RLRDLLPRVATLPLGSGALAGNPFLVDR-Q---FIAKELG---FGGG---VCPNSMDAVSDRDFVIETVFAASLLCVHLSRW-AEDLIIYSSGP-FGYVQCSDAYAT-..GSSLMPQKKNPDALEL---IRGKGGRVQG |
| CRD1_ANAPL/11-305 | GRFVGSTDPIMQMLSTSISTEQRLSEVDIQ-------ASIAYAKALEKAGILT-.--KTELEKILSGLEKISEELSKG-VIVVTQSDEDIQTANERRLKELIG-----------------DIAGKLHTGRSRNEQVVTDLKLFMKNSLSI-ISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLSHAVALTRDSE-RLGEVKKRINVLPLGSGALAGNPLDIDR-E---MLRSELE---FAS----ISLNSMDAISERDFVVEFLSVATLLLIHLSKM-AEDLIIYSTSE-FGFLTLSDAFST-..GSSLMPQKKNPDSLEL---IRSKAGRVFG |
| ARLY_HUMAN/11-305 | GRFVGAVDPIMEKFNASIAYDRHLWEVDVQ-------GSKAYSRGLEKAGLLT-.--KAEMDQILHGLDKVAEEWAQG-TFKLNSNDEDIHTANERRLKELIG-----------------ATAGKLHTGRSRNDQVVTDLRLWMRQTCS-TLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQPIRWSHWILSHAVALTRDSE-RLLEVRKRINVLPLGSGAIAGNPLGVDR-E---LLRAELN---FGA----ITLNSMDATSERDFVAEFLFWRSLCMTHLSRM-AEDLILYCTKE-FSFVQLSDAYST-..GSSLMPQKKNPDSLEL---IRSKAGRVFG |
| ARLY_ECOLI/6-301 | GRFTQAADQRFKQFNDSLRFDYRLAEQDIV-------GSVAWSKALVTVGVLT-.--AEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVG-----------------QLGKKLHTGRSRNDQVATDLKLWCKDTVSE-LLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDES-RLQDALKRLDVSPLGCGALAGTAYEIDR-E---QLAGWLG---FAS----ATRNSLDSVSDRDHVLELLSAAAIGMVHLSRF-AEDLIFFNTGE-AGFVELSDRVTS-..GSSLMPQKKNPDALEL---IRGKCGRVQG |
| FUMC_SULSO/1-315 | MKYTDTAPKLFMNTGTKFPRRIIWS-------------MGVLKKSCAKVNADLGlLDKKIADSIIKASDDLID-GKLDDKIVLDVFQTGSGTGLNMNVNEVIAEVASSYSN------LKVHPNDHVNFGQSSNDTVPTAIRIAAVAEVTNRLLPALQQIISSLNKKAEEYKDVIKAGRTHLRDALPVTLGQELSAYADAFQHEHE-QVMNIL-EYVKELPIGGTATGTGLNSHP-EFQERVINEIN--RITGLG-FKPANRFRAMRLLTDLLLLSGALRNIAVDLYRLG-QDIRLMFSGPLTGLNEIDLPTQEEiaGSSIMPGKTNPVTVEA---TLLISAQVVG |
| FUMH_YEAST/36-367 | GEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGgLDPKISKAIQQAADEVAS-GKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQ-VHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQ-RVAHSL-KTLSFLAQGGTAVGTGLNTKP-GFDVKIAEQIS--KETGLKFQTAPNKFEALAAHDAIVECSGALNTLACSLFKI-AQDIRYLGSGPRCGYHELMLPENEP..GSSIMPGKVNPTQNEA---LTQVCVQVMG |
| FUMH_HUMAN/58-389 | GELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYG.LDPKIANAIMKAADEVAE-GKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMT-RIKAAM-PRIYELAAGGTAVGTGLNTRI-GFAEKVAAKVA--ALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKI-ANDIRFLGSGPRSGLGELILPENEP..GSSIMPGKVNPTQCEA---MTMVAAQVMG |
| FUMC1_BRAJA/22-352 | GPIEVPSDRYWGAQTERSRQNFRIG--TDRMPISLVHALGIVKLAAAQSNRELGlLDQRRASAIIRAAREVID-GSLDDHFPLVVWQTGSGTQTNMNLNEVIANRANELLGGELGAKKPVHPNDHVNMSQSSNDSFPTAMHIAAASRITADLVPALGELLRALRKKEKEFAKIVKIGRTHTQDATPLTLGQEFSGYAAQVESGIA-RLKVAV-KELYPLAQGGTAVGTGLNAKP-RFARLFAKHVA--GITKLPFTSAANKFEALASNDAYVLAHGAISSVATGLFKI-ANDIRLLGSGPRSGLGELILPENEP..GSSIMPGKVNPTQCEA---MTMVCCQVFG |
| FUMC_BACSU/11-340 | GEVKVPADKFWGAQTQRSKENFKIG--SEKMPMRVVKAFAILKRSTALANKRLGnLDAEKAEAIAAVCDDVLK-GKYDDNFPLVVWQTGSGTQSNMNMNEVVANRATALLK-EKNSDQTIHPNDDVNRSQSSNDTFPTAMHVAAVLAVYEQLVPALDQLRNTLDEKAKAYNDIVKIGRTHLQDATPLTLGQEISGWVHMLDRSKE-MILEATDKMRALAIGG-TAVGTGINAHP-EFGELVSEEIT--KLTGQTFSSSPNKFHALTSHDEITYAHGALKALAADLMKI-ANDVRWLASGPRCGIGEIVIPENEP..GSSIMPGKVNPTQSEA---LTMIAAQIMG |
| FUMC_ECOLI/12-342 | GAIDVPADKLWGAQTQRSLEHFRIS--TEKMPTSLIHALALTKRAAAKVNEDLGlLSEEKASAIRQAADEVLA-GQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLK-HIEYSL-PHVAELALGGTAVGTGLNTHP-EYARRVADELA--VITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKI-ANDVRWLASGPRCGIGEISIPENEP..GSSIMPGKVNPTQCEA---LTMLCCQVMG |
| ASPA_BACSU/16-345 | GEKQIEADVYYGIQTLRASENFPITG--YKIHEEMINALAIVKKAAALANMDVKrLYEGIGQAIVQAADEILE-GKWHDQFIVDPIQGGAGTSMNMNANEVIGNRALEIMGHKKGDYIHLSPNTHVNMSQSQNDVFPTAIHISTLKLL-EKLLKTMEDMHSVFKQKAQEFHSVIKMGRTHLQDAVPIRLGQEFEAYSRVLERDIK-RIKQSR-QHLYEVNMGATAVGTGLNADP-EYIKQVVKHLA--DISGLPLVGADHLVDATQNTDAYTEVSASLKVCMMNMSKI-ANDLRLMASGPRAGLAEISLPARQP..GSSIMPGKVNPVMAEL---INQIAFQVIG |
| ASPA_PSEFL/19-351 | GVLEVPAQAYYGIQTLRAVNNFRLSGVPISHYPKLVVGLAMVKQAAADANRELGqLSERKHAAISEACARLIR-GDFHEEFVVDMIQGGAGTSTNMNANEVIANIALEAMGHQKGEYQYLHPNNDVNMAQSTNDAYPTAIRLGLLLGH-DALLASLDSLIQAFAAKGAEFSHVLKMGRTQLQDAVPMTLGQEFRAFATTLGEDLA-RLKTLAPELLTEVNLGGTAIGTGINADP-RYQALAVQRLA--TISGQPLVPAADLIEATSDMGAFVLFSGMLKRTAVKLSKI-CNDLRLLSSGPRTGINEINLPARQP..GSSIMPGKVNPVIPEA---VNQVAFQVIG |
| ASPA_ECOLI/13-345 | GTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKELQtIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL-IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVK-NIQRTA-ELLLEVNLGATAIGTGLNTPK-EYSPLAVKKLA--EVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKI-CNDLRLLSSGPRAGLNEINLPELQA..GSSIMPAKVNPVVPEV---VNQVCFKVIG |
| PCAB_PSEPU/8-300 | AYFT--APAMREIFSDRGRLQGMLD------------FEAALARAEAAAGLVP-.--HSAVAAIEAACKAERYDVGAL-ANAIATAGNSAIPLVKA-LGKVIA------SG-------VPEAERYVHLGATSQDAMDTGLVLQLRDAL-DLIEADLGKLADTLSQQALKHADTPMVGRTWLQHATPVTLGMKLAGVLGALTRHRQ-RLQELGPPCWCCSSGGASGSLAALGSKAMPVAEALAEQLK---LSL----PEQPWH---TQRDRLVEFASVLGLVAGSLGKFG-RDVSLLMQTE-AGEVFEPSAPGKG..GSSTMPHKRNPVGAAV---LIGAATRVPG |
| PUR8_BACSU/3-286 | ERYS--RPEMSAIWTDENRFQAWLE------------VEILACEAWAELGVIP-.------KEDVKVMRENAS-FDINRILEIEKDTRHDVVAFTRAVSESLG-----------------EERKWVHYGLTSTDVVDTALSYLLKQAN-DILLKDLERFVDIIKEKAKEHKYTVMMGRTHGVHAEPTTFGLKLALWHEEMKRNLE-RFKQAKAGIEVGKISG--AVGTYANIDP-FVEQYVCEKLG-----L----KAAPISTQTLQRDRHADYMATLALIATSIEKF-AVEIRGLQKSE-TREVEEFFAKGQK..GSSAMPHKRNPIGSEN---MTGMARVIRG |
| PUR8_CHICK/1-287 | ---------MGFNFSER--KKFGTWRRL---------WLY-LAQAEKSLGLP--.----ITDEQIKEMEANLDNI---DFKMAAEEEKKLRHDVMAHVHTFA--------------HCCPKAAAIIHLGATSCYVGDNTDLIVLRDGFN-LLLPKLARVISRLADFAETHADLPTLGFTHYQPAQLTTVGKRCCLWIQDLCMDLQN-LERARDDLRFRGVKGTTGTQASFLQLF-EGDHSKVEELDRLVTAKAGFKRSYMVTGQTYSRKVDIEVLSVLASLGASVHKI-CTDIRLLAN---LKEIEEPFEKDQI..GSSAMPYKRNPMR----SERCCSLARHLM |
| PUR8_ECOLI/14-321 | GRYGDKVSALRGIFSEYGLLKFRVQVEVR--------WLQKLAAHAAIKEVPA-.----FAADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKA-VEYFLK----EKVA---EIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTIGK--EMANVAYRMERQ--YRQLNQVEILGKINGAVGNYNAHIAAY-P--EVDWHQFSEEFVTSLGIQWNPYTT-QIEPHDYIAELFDCVARFNTILIDF-DRDVWGYIA---LNHFKQKTIAGEI..GSSTMPHKVNPIDFE-NSEGNLGLSNAVL |