EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00205 alignment
(22 sequences with 561 bp)


ILVB_LACLA/199-352 CAATTGCAAGAATTACTGACAGAACTTTCTGTCAGTAAAAAACCAGTCATTATTGCTGGCGGAGGAATTAATTAT...TCTGGCTCAGTTGATATTTTCAGAGCATTTGTCGAAAAATATCAAATTCCAGTTGTTTCTACATTGCTTGGC...TTAGGAACATTACCAATCAGCCAC...---------GAATTGCAACTAGGAATGGCAGGAATGCACGGTTCATACGCTGCAAATATGGCTTTAGTTGAAGCTGACTATATTATTAATTTGGGATCA...CGTTTT---GACGATAGAGTTGTATCCAATCCTGCAAAATTTGCTAAAAATGCTGTC---........................---GTTGCTCATATTGATATTGAC...GCTGCTGAACTTGGCAAAATTGTAAAAACC............GATATTCCAATCCTTTCTGATTTGAAAGCGGCTTTAAGCAGACTTTTGCAATTAAATAAGGTCAGG...---------...------ACTGACTTTAAT.........GATTGGATTAAAACTGTC
ILVB_SPIPL/205-366 CAAATTAATCAGGCTTTACAGTTGATTTCCGAAGCTACTAAACCCCTCCTATATGTGGGGGGAGGTGCAATTATG...GCGGGGGCTCATGCTGAAATCGCCGAATTGTCGGAACGCTTCCAAATACCAGTTACTAGCACTTTGATGGGA...AAAGGTCGTTTTGATGAAAATCACcccCTATCT---CTGGGAATCGTGGGAATGCTGGGAATGCACGGAACCGCCTATGCTAATTTTGCGGTGATGGAATTGGATTTCGTGATCGCGGTGGGGGTT...CGCTTT---GATGACCGGGTGGCGGGTACTGGAGATCAATTCGCCCATAGCGCTAAG---........................---GTGATTCATATTGATATTGAC...CCGGCGGAAGTGGGCAAAAATCGCAGTACT............GATGTTCCTATTGTGGGAGATGTGCGACAGGTTTTGGGGGATATGCTACAACGTACGTATCATTGG...GAACGGAAA...TTAAGCCGGAACAAACCC.........AGGAATGGCACTGACCTT
ILVB_PORPU/205-363 CAAATACTAATGGCTGCAAAAATGATTCAACAATCAAGTCAGCCATTATTATATATTGGTGGTGGAGCTATAATT...TCTGATGCTCACAGTATAATTAAAGAATTAGTTGACTTATATAAAATACCAGTAACTACAACTCTTATGGGC...AAAGGTATCTTTAATGAG------...GATAGT---GAATTTTGTCTAGGTATGCTCGGAATGCATGGGACTGCGTACGCTAATTTTGCAGTTAGCGAGTGTGATCTTCTGATTGCTCTAGGAGCT...AGATTT---GATGATAGGGTAACTGGTAAATTAGATGAATTCGCTTGTAATGCTCAA---........................---GTTATTCATGTAGATATTGAT...CCAGCCGAAGTTGGTAAAAATAGAATACCT............CAAGTTGCTATTGTTGGTGATGTTACAGAAGTTGTTACTTCACTTTTGAATTTACTGAAAAATAAT...TTTAAGCCT...TATCCAGAGCAAATTATA.........TCTTGGCAAGAAAGAATA
ILVG_ECOLI/185-334 GAAGTTGAGCAAGCGCGCCAGATGCTGGCAAAAGCGCAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATG...GCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGG...CTGGGCGCAGTAGAAGCAGATTAT...---------CCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTCGCGGTGCAGGAGTGTGACCTGCTGATCGCCGTGGGCGCA...CGTTTT---GATGACCGGGTGACCGGCAAACTGAACACCTTCGCGCCACACGCCAGT---........................---GTTATCCATATGGATATCGAC...CCGGCAGAAATGAACAAGCTGCGTCAGGCA............CATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAA---...---------...---------------TAT.........GACTGGCAGCAACACTGC
ILVB_ECOLI/201-350 ---ATTCGTGACGCAGCGGCGATGATTAACGCTGCCAAACGCCCGGTGCTTTATCTGGGCGGCGGTGTGATCAAT...GCGCCCGCACGG------GTGCGTGAACTGGCGGAGAAAGCGCAACTGCCTACCACCATGACTTTAATGGCG...CTGGGCATGTTGCCAAAAGCGCAT...---------CCGTTGTCGCTGGGTATGCTGGGGATGCACGGCGTGCGCAGCACCAACTATATTTTGCAGGAGGCGGATTTGTTGATAGTGCTCGGTGCG...CGTTTT---GATGACCGGGCGATTGGCAAAACCGAGCAGTTCTGTCCGAATGCCAAA---........................---ATCATTCATGTCGATATCGAC...CGTGCAGAGCTGGGTAAAATCAAGCAGCCG............CACGTGGCGATTCAGGCGGATGTTGATGACGTGCTGGCGCAGTTGATCCCGCTGGTGGAAGCGCAA...CCGCGT---...---------------GCA.........GAGTGGCACCAGTTGGTA
ILVB_CORGL/215-372 CAGATCGAGCAGGCAGTCAAGCTGATCGGTGAGGCCAAGAAGCCCGTCCTTTACGTTGGTGGTGGCGTAATCAAG...GCTGACGCACACGAAGAGCTTCGTGCGTTCGCTGAGTACACCGGCATCCCAGTTGTCACCACCTTGATGGCT...TTGGGTACTTTCCCAGAGTCTCAC...---------GAGCTGCACATGGGTATGCCAGGCATGCATGGCACTGTGTCCGCTGTTGGTGCACTGCAGCGCAGCGACCTGCTGATTGCTATCGGCTCC...CGCTTT---GATGACCGCGTCACCGGTGACGTTGACACCTTCGCGCCTGACGCCAAG---........................---ATCATTCACGCCGACATTGAT...CCTGCCGAAATCGGCAAGATCAAGCAGGTT............GAGGTTCCAATCGTGGGCGATGCCCGCGAAGTTCTTGCTCGTCTGCTGGAAACCACCAAGGCAAGC...AAGGCAGAG...---ACCGAGGACATCTCC.........GAGTGGGTTGACTACCTC
ILVB_BACSU/205-358 CAGATCCGCAAGCTTGTGGAAGCCGTGAGCAGTGCGAAAAAACCGGTGATCCTGGCGGGTGCGGGCGTACTGCAC...GGAAAAGCGTCAGAAGAATTAAAAAATTATGCTGAACAGCAGCAAATCCCTGTGGCACACACCCTTTTGGGG...CTCGGAGGCTTCCCGGCTGACCAT...---------CCGCTTTTCCTAGGGATGGCGGGAATGCACGGTACTTATACAGCCAATATGGCCCTTCATGAATGTGATCTATTAATCAGTATCGGCGCC...CGTTTT---GATGACCGTGTCACAGGAAACCTGAAACACTTTGCCAGAAACGCAAAG---........................---ATAGCCCACATCGATATTGAT...CCAGCTGAAATCGGAAAAATCATGAAAACA............CAGATTCCTGTAGTCGGAGACAGCAAAATTGTCCTGCAGGAGCTGATCAAACAAGACGGCAAACAA...---------...------AGCGATTCAAGC.........GAATGGAAAAAACAGCTC
ILV1_BRANA/273-429 CAGTTAGGTCAGATCGTTAGGTTGATCTCGGAGTCTAAGAGGCCTGTTTTGTACGTTGGTGGTGGAAGCTTGAAC...TCGAGTGAAGAA------CTGGGGAGATTTGTCGAGCTTACTGGGATCCCCGTTGCGAGTACTTTGATGGGG...CTTGGCTCTTATCCTTGTAACGAT...---------GAGTTGTCCCTGCAGATGCTTGGCATGCACGGGACTGTGTATGCTAACTACGCTGTGGAGCATAGTGATTTGTTGCTGGCGTTTGGTGTT...AGGTTT---GATGACCGTGTCACGGGAAAGCTCGAGGCTTTCGCTAGCAGGGCTAAA---........................---ATTGTGCACATAGACATTGAT...TCTGCTGAGATTGGGAAGAATAAGACACCT............CACGTGTCTGTGTGTGGTGATGTAAAGCTGGCTTTGCAAGGGATGAACAAGGTTCTTGAGAACCGG...GCGGAGGAG...CTCAAGCTTGATTTCGGT.........GTTTGGAGGAGTGAGTTG
ILVB_SCHPO/284-449 AAGATCGATCGTGTTGCCAATTTACTAAAATTAGCCAAGAAGCCTGTGATTTTCTGTGGGCATGGTGTTTTAGCTaatCCCGAATGCCCCACTTTGTTACGCAAGTTTAGCGAAAGGCTGCAAATTCCTGTTACTACTTCTTTGCTTGGA...CTTGGTGCTGTAGATGAACGTTCT...---------GACCTTAGTTTGCATATGCTCGGTATGCATGGTAGTGGATACGCTAATATGGCCATGCAGGAAGCCGATCTTATCCTTGCTCTTGGTGTT...CGCTTT---GACGACCGTGTCACCGGTAACGTAAGTTTGTTTGCTCCTCAAGCA---CGTcttgctgctgccgaagagcgtggcGGTATTATTCACTTTGATATTTCA...CCCAAAAATATCGGTAAGGTCGTACAACCT............ACTGAAGCAATAGAGGGCGATGTATACGAATCTCTAAAGCTTTTAGATTCTGCTACTAAAAAT---...---------...------ATTAAAATTCCTtcccgatttGACTGGTTATCTCAAATT
POXB_LACPL/201-350 GCAGTGACGAGATTGACACAGACTTTACTCGCAGCTGAACGGCCACTTATTTACTATGGCATTGGAGCTCGTAAG...GCTGGTAAAGAA------CTCGAACAATTGAGTAAAACGTTGAAAATTCCATTAATGAGTACGTATCCAGCT...AAGGGGATTGTCGCAGATCGTTAT...---------CCAGCCTATTTGGGTTCTGCTAATCGGGTGGCACAAAAACCGGCGAATGAGGCACTTGCGCAAGCTGACGTTGTTTTATTTGTTGGTAAT...---------AATTATCCGTTTGCAGAAGTTTCCAAAGCGTTTAAAAATACGCGTTAT---........................---TTCTTACAAATTGATATTGAT...CCGGCTAAGTTAGGTAAACGACATAAAACA............GATATTGCGGTACTTGCTGATGCACAAAAGACGCTGGCTGCAATTTTAGCACAGGTATCTGAACGG...---------...------GAGTCGACACCT.........TGGTGGCAAGCCAATTTA
POXB_ECOLI/190-336 GAGTTACGCAAACTGGCGCAACTGCTGCGTTATTCCAGCAATATCGCCCTGATGTGTGGCAGCGGCTGCGCGGGG...GCGCATAAAGAG------TTAGTTGAGTTTGCCGGGAAAATTAAAGCGCCTATTGTTCATGCCCTGCGCGGT...AAAGAACATGTCGAATACGATAAT...---------CCGTATGATGTTGGAATGACCGGGTTAATCGGCTTCTCGTCAGGTTTCCATACCATGATGAACGCCGACACGTTAGTGCTACTCGGCACG...CAATTT---CCCTACCGCGCCTTCTACCCGACCGATGCCAAA------------------........................---ATCATTCAGATTGATATCAAC...CCAGCCAGCATCGGCGCTCACAGCAAGGTG............GATATGGCACTGGTCGGCGATATCAAGTCGACTCTGCGTGCATTGCTTCCATTGGTGGAAGAAAAA...---------...------GCCGATCGCAAG.........TTTCTGGATAAAGCGCTG
IOLD_BACSU/162-336 GAGCTTCAAGGTGCGGCGGAGCTGATTAAATCCAGCAAAAAACCTGTGATTCTCGTCGGCGGAGGCGCAAAATAT...TCCGGTGCGCGCGATGAATTGGTTGCCATTTCTGAAGCCTATAACATTCCGTTAGTTGAAACGCAGGCAGGA...AAGTCTACCGTTGAGGCAGATTTT...---------GCGAACAACCTTGGCGGAATGGGCATCACAGGTACACTTGCGGCAAACAAAGCGGCCCGCCAAGCTGATTTGATTATCGGCATCGGCACA...AGGTAT---ACAGATTTTGCGACATCCTCTAAGACCGCTTTTGATTTTGATAAAGCGAAGtttttgaac...attaacgtcagcCGAATGCAGGCGTATAAACTTGATgcaTTCCAAGTGGTGGCGGATGCGAAAGTGACGcttggcaaactgCACGGCTTGCTTGAAGGCTATGAGAGCGAGTTCGGCACAACGATCCGGGAGCTGAAGGACGAATGGctaGCTGAACGCgagCGTCTCAGCAAAGTGACG.........TTTAAGCGGGAAGCATTT
YEC0_YEAST/194-347 AAGATCAAAAAAGTCGTACAGCTTATTTTGCAACATAAAAATAAAAATATTCTGATTGTTATTGGAAAGGGTGCG...GTAAAAAACTCACACGAAATCCGCAGACTAGTAAATACGTTCAATCTACCATTTTTACCCACCCCAATGGCT...AAGGGAATTGTCCCAGACTCTTCT...------------------------------CCACTGAACGTTTCATCTGCAAGATCTCAAGCATTGAAAATAGCGGATATTGTTCTTGTTCTCGGGGCA...AGATTAAACTGGATATTGCATTTTGGTACTTCACCCAAATGGAACTCAGAATCC------........................ATATTCATCCAGTTCGATTCCAATcccGAAACCTTGGGGGATAACAATGTCTCACCTggt......gctGACCTTTCCATATGGGGAGATATAGGCTTGAGCGTAACCGCTTTAGTTGAGGAATTGACTCGCCAA...---GATTCC...---TGCTGGAAGTATAGT.........GGTGTTAAGCAAGAAATA
OXC_OXAFO/202-351 GCTATCGCTCGCGCTGCTGACCTGATCAAGAACGCCAAACGTCCAGTTATCATGCTGGGTAAAGGCGCTGCATAC...GCACAATGCGACGACGAAATCCGCGCACTGGTTGAAGAAACCGGCATCCCATTCCTGCCAATGGGTATGGCT...AAAGGCCTGCTGCCTGACAACCAT...------------------------------CCACAATCCGCTGCTGCAACCCGTGCTTTCGCACTGGCACAGTGTGACGTTTGCGTACTGATCGGCGCT...CGTCTGAACTGGCTGATGCAGCACGGTAAAGGCAAAACCTGGGGCGACGAACTGAAGAAA........................---TACGTTCAGATCGACATCCAG...GCTAACGAAATGGACAGCAACCAGCCTATC............GCTGCACCAGTTGTTGGTGACATCAAGTCCGCCGTTTCCCTGCTCCGCAAAGCACTGAAAGGC---...---------...GCTCCAAAAGCTGACGCT.........GAATGGACCGGCGCTCTG
ILVX_BACSU/200-359 GCAATCAGTGCGGCCATAGCAAAAATCCAAACAGCAAAACTTCCTGTCGTTTTGGTCGGCATGAAAGGCGGAAGA...CCGGAAGCAATTAAAGCGGTTCGCAAGCTTTTGAAAAAGGTTCAGCTTCCATTTGTTGAAACATATCAAGCT...GCCGGTACCCTTTCTAGAGATTTA...------GAGGATCAATATTTTGGCCGTATCGGTTTGTTCCGCAACCAGCCTGGCGATTTACTGCTAGAGCAGGCAGATGTTGTTCTGACGATCGGC---...---------TATGACCCGATTGAATATGATCCGAAATTCTGGAATATCAATGGAGACCGG........................ACAATTATCCATTTAGACGAGATT...ATCGCTGACATTGATCATGCTTACCAGCCT............GATCTTGAATTGATCGGTGACATTCCGTCCACGATCAATCATATCGAACACGATGCTGTGAAAGTGgaaTTTGCAGAG...CGTGAGCAGAAAATCCTT.........TCTGATTTAAAACAATAT
ILVB_KLEPN/196-355 GCCATCGACCAGGTGGCGAAGCTTATCGCCCAGGCGAAGAACCCGATCTTCCTGCTCGGCCTGATGGCCAGCCAG...CCGGAAAACAGCAAGGCGCTGCGCCGTTTGCTGGAGACCAGCCATATTCCAGTCACCAGCACCTATCAGGCC...GCCGGAGCGGTGAATCAGGATAAC...------TTCTCTCGCTTCGCCGGCCGGGTTGGGCTGTTTAACAACCAGGCCGGGGACCGTCTGCTGCAGCTCGCCGACCTGGTGATCTGCATCGGC---...---------TACAGCCCGGTGGAATACGAACCGGCGATGTGGAACAGC---GGCAACGCG........................ACGCTGGTGCACATCGACGTGCTG...CCCGCCTATGAAGAGCGCAACTACACCCCG............GATGTCGAGCTGGTGGGCGATATCGCCGGCACTCTCAACAAGCTGGCGCAAAATATCGATCATCGGctgGTGCTCTCCccgCAGGCGGCGGAGATCCTC.........CGCGACCGCCAGCACCAG
MDLC_PSEPU/189-333 GATCTCGATATTCTGGTGAAAGCTCTCAACAGCGCATCCAACCCGGCGATCGTCCTGGGCCCGGACGTCGACGCA...GCAAATGCGAACGCAGACTGCGTCATGTTGGCCGAACGCCTCAAAGCTCCGGTTTGGGTTGCGCCATCCGCTccaCGCTGCCCATTCCCTACCCGTCAT...------CCTTGCTTCCGTGGATTGATGCCA------GCTGGCATCGCAGCGATTTCTCAGCTGCTCGAAGGTCACGATGTGGTTTTGGTAATCGGCGCTccaGTGTTC------CGTTACCACCAATACGACCCAGGTCAATATCTCAAACCTGGCACG---........................CGATTGATTTCGGTGACCTGCGAC...CCGCTCGAAGCTGCACGCGCGCCAATGGGC............GAT---GCGATCGTGGCAGACATTGGTGCGATGGCTAGCGCTCTTGCCAACTTGGTTGAAGAG---...---------...------------------.........------------AGCAGC
DCPY_ZYMMO/198-346 GCGGTTGAAGAAACCCTGAAATTCATCGCCAACCGCGACAAAGTTGCCGTCCTCGTCGGCAGCAAGCTGCGCGCA...GCTGGTGCTGAAGAAGCTGCTGTCAAATTTGCTGATGCTCTCGGTGGCGCAGTTGCTACCATGGCTGCTGCA...AAAAGCTTCTTTCCAGAAGAAAAC...------CCGCATTACATCGGCACCTCATGGGGTGAAGTCAGCTATCCGGGCGTTGAAAAGACGATGAAAGAAGCCGATGCGGTTATCGCTCTGGCTCCT...GTCTTC---AACGACTACTCCACCACTGGTTGGACGGATATTCCTGATCCTAAGAAA---........................---CTGGTTCTCGCTGAACCGCGT...TCTGTCGTCGTTAACGGCATTCGCTTCCCC............AGCGTCCATCTGAAAGACTATCTGACCCGTTTGGCTCAGAAAGTTTCCAAGAAAACCGGTGCA---...---------...------------------.........---TTGGACTTCTTCAAA
DCPY_NEUCR/204-351 GCCGCCAAGTGCGCTGCCGAGTATCTCGACGGCAAGCTCAAGCCCGTCATCCTGGTTGGCCCCAAAGCTGGCCGT...GCCGGTTCCGAGAAAGAGCTCATCGAGTTCGCCGAGGCCATGGGCTGTGCTGTTGCCCTGCAACCTGCCGCC...AAGGGCATGTTCCCCGAAGACCAC...------AAGCAGTTCGTCGGCATCTTCTGGGGACAAGTTAGCTCCGATGCCGCAGACGCCATGGTGCACTGGGCCGACGCCATGATTTGCGTCGGCGCC...GTCTTT---AACGACTACAGCACGGTCGGATGGACTGCCGTGCCCAAC---ATCCCG---........................---CTCATGACCGTCGATATGGAT...CATGTCACCTTCCCCGGCGCACACTTCAGC............CGCGTCCGGATGTGCGAATTCCTCAGCCACCTGGCCACCCAGGTCACCTTCAACGACTCCACC---...---------...------------------.........---ATGATCGAGTACAAG
DCP1_MAIZE/245-394 GCCGTGGAGGCGGCGGCCGACTTCCTCAACAAGGCGGTGAAGCCGGTGATGGTGGGCGGGCCCAAGATCCGGGTG...GCCAAGGCCAGGGAGGCGTTCGCCGCCGTCGCGGACGCCAGCGGGTACCCTTTCGCCGTCATGCCGGCCGCC...AAGGGCCTGGTGCCGGAGCACCAC...------CCGCGCTTCATCGGCACCTACTGGGGCGCCGTCAGCACCACCTTCTGCGCCGAGATCGTGGAGTCCGCCGACGCCTACCTCTTCGCCGGGCCC...ATCTTC---AACGACTACAGCTCCGTCGGCTACTCCCTCCTGCTCAAGCGGGAGAAG---........................---GCCGTCATCGTGCAGCCCGACcgcATGGTGGTCGGCGACGGCCCGGCGTTCGGC............TGCATCCTCATGCCCGAGTTCCTCCGCGCGCTCGCCAAGCGCCTCAGGCGCAACACCACGGCG---...---------...------------------.........---TACGACAACTACCGC
DCPY_KLUMA/200-348 GTTCTAGAAACCGTTTTGGAATTGATCAAGGACGCCAAGAACCCAGTTATCTTGGCCGATGCTTGTTGTTCCAGA...CACAACGTTAAGGCTGAAACCAAGAAGTTGATTGACATCACTCAATTCCCAGCCTTCGTTACCCCAATGGGT...AAGGGTTCCATTGACGAACAACAC...------CCAAGATTCGGTGGTGTCTACGTCGGTACCTTGTCTTCTCCAGAAGTTAAGGAAGCTGTTGAATCCGCTGACTTGGTTCTATCTGTCGGTGCT...CTATTG---TCCGATTTCAACACCGGTTCTTTCTCTTACTCTTACAAGACCAAGAAC---........................---ATTGTCGAATTCCACTCCGAC...TACATCAAGGTCAGAAACGCCACTTTCCCA............GGTGTCCAAATGAAGTTCGTCTTGCAAAAGTTGTTGACCAAGGTCAAGGATGCTGCTAAGGGT---...---------...------------------.........---TACAAGCCAGTTCCA
DCIP_ENTCL/198-346 TTCCGGGATGCTGCTGAGAACAAACTGGCGATGAGCAAACGTACCGCGCTGCTGGCCGACTTCCTTGTTCTGCGC...CATGGCCTGAAACATGCGCTACAGAAGTGGGTGAAAGAGGTACCGATGGCCCATGCCACCATGCTGATGGGG...AAAGGGATATTCGACGAGCGTCAG...------GCGGGTTTTTACGGCACATACAGTGGTTCAGCCAGCACTGGCGCGGTAAAAGAGGCGATTGAAGGGGCTGACACGGTATTGTGTGTTGGCACG...CGTTTT---ACCGATACCCTGACGGCCGGGTTCACGCACCAGCTTACCCCGGCGCAG---........................---ACCATTGAAGTTCAGCCGCAT...GCCGCACGCGTCGGGGATGTCTGGTTTACC............GGCATCCCAATGAACCAGGCGATTGAGACGCTGGTCGAACTCTGCAAACAGCACGTGCATGCT---...---------...------------------.........---GGCCTTATGTCGTCA