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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF00197 alignment |
| WIN3_POPSP/32-195 | GCAGTGCTCGATTTCTACGGTCGTGAGGTGCAAGCTGGTGCAAGCTATTTAATCGATCAAGAAGATTTTCGTGTGGTCAAT---------------------------GCGACTATCAACCCCATATGCAATTCAGATGTTATACTTTCCACCGGGATCGAGGGC---......------CTCCCAGTAACATTTTCACCA---GTTATAAATTCCACCGATGGTGTCATCCGCGAAGGAACTTTGATTACTGTGAGCTTTGATGCAAGCACATGTGGGATGGCAGGCGTGACACCC...------ATGTGGAAGATTGGATTCAATTCAACAGCCAAAGGATAC---ATTGTGACCACAGGAGGTGTTGATAGA---------------------TTGAATCTGTTTAAGATCACCAAGTTTGAAAGT------......---GATAGTAGTTTTTATCAGCTTTCTTATTGTCCAAACTCCGAACCC---...---...------TTCTGTGAATGCCCATGCGTCCCAGTTGGCGCCAACAGTGAC---------------AAGTACTTGGCTCCCAATGTCAGCTATGCTGATTTTAGGTTTAAACCGGATGCG |
| SPR1_IPOBA/42-216 | CCAGTACTGGACATCAACGGCGACGAGGTCCGCGCCGGCGGGAACTACTACATGGTCTCCGCCATATGGGGAGCCGGCGGGGGAGGGCTAAGACTCGCCCACTTGGACATGATGTCCAAA------TGCGCCACGGACGTCATCGTATCCCCCAACGACTTAGAC---......AACGGCGACCCCATCACCATCACGCCGGCGACGGCCGACCCGGAATCCACCGTGGTCATGGCGTCGACGTACCAGACTTTCCGGTTCAACATCGCCACCAACAAGCTCTGCGTGAAC------...AACGTGAACTGGGGAATCCAG---CACGACAGCGCGTCCGGGCAGTATTTCCTGAAAGCCGGCGAGTTTGTGTCCGAC---------AATAGCAACCAGTTCAAGATTGAGCTGGTGGATGCCAACCTTAACTCC......---------------TACAAACTCACTTACTGTCAGTTCGGC---------...---...------------TCCGATAAATGCTACAACGTCGGCAGATTCCACGACCACATGTTGAGGACCACGCGTTTGGCTCTCTCCAAT------TCTCCCTTCGTTTTTGTCATCAAACCT |
| IAAS_HORVU/27-199 | CCGGTGCACGACACGGACGGCCACGAGCTGCGCGCCGACGCCAACTACTACGTCCTCTCGGCCAACCGCGCCCACGGCGGGGGG------------CTGACGATGGCGCCCGGCCACGGGCGCCACTGCCCGCTCTTCGTGTCGCAGGACCCCAACGGGCAGCAC---......GACGGGTTCCCCGTGCGCATCACCCCGTACGGCGTCGCGCCGTCCGACAAGATCATCCGGCTGTCGACCGACGTACGCATATCCTTCCGCGCCTACACG------ACGTGTCTGCAGTCCACT...------GAGTGGCACATCGACAGCGAGCTGGCGGCGGGCCGCCGG---CACGTGATCACCGGCCCGGTCAAGGACCCGAGCCCGAGCGGCAGGGAGAAC---GCCTTCCGCATCGAGAAGTACAGCGGCGCGGAG......------GTGCACGAGTACAAGCTGATGTCGTGCGGGGAC------------...---...------------------TGGTGCCAGGACCTCGGC---GTGTTCAGGGACCTCAAGGGTGGGGCGTGGTTCTTGGGCGCCACCGAG---CCATACCATGTCGTCGTGTTCAAGAAG |
| ASP_THECC/30-208 | CCTGTGCTTGACACTGATGGTGATGAGCTCCAAACTGGGGTTCAATATTACGTCTTGTCATCGATATCGGGTGCTGGGGGTGGAGGGCTAGCCCTAGGAAGGGCTACAGGTCAAAGC---------TGCCCAGAAATTGTTGTCCAAAGACGATCCGACCTTGAC---......AATGGTACTCCTGTAATCTTTTCAAAT------GCGGATAGCAAAGATGATGTTGTCCGCGTATCTACTGATGTAAACATAGAGTTCGTTCCCATCAGAGACAGACTCTGCTCAACG------...TCAACTGTGTGGAGGCTTGACAATTATGACAACTCGGCAGGCAAATGGTGGGTGACAACTGATGGGGTTAAAGGTGAACCTGGTCCTAACACTTTGTGCAGTTGGTTTAAGATTGAGAAGGCCGGAGTACTCGGT......---------------TACAAATTCAGGTTCTGTCCTTCTGTCTGTGATTCG...---...---------TGCACAACTTTATGCAGCGATATTGGAAGACATTCAGATGATGATGGACAAATA---CGTTTGGCTCTCAGTGAC------AATGAATGGGCATGGATGTTTAAGAAA |
| MIRA_RICDU/35-216 | CCGGTTCTTGACATAGACGGAGAGAAACTCCGGACGGGGACCAATTATTACATTGTGCCGGTGCTCCGCGACCATGGCGGCGGC---CTTACAGTATCCGCCACCACCCCCAACGGCACCTTCGTTTGTCCACCCAGAGTTGTCCAAACACGAAAGGAGGTCGAC---......CACGATCGCCCCCTCGCTTTCTTTCCA------GAGAACCCAAAGGAAGACGTTGTTCGAGTCTCCACCGATCTCAACATCAATTTCTCGGCGTTCATG---------CCCTGTCGTTGGACCagtTCCACCGTGTGGCGGCTCGACAAATACGATGAATCCACGGGGCAGTACTTCGTGACCATCGGCGGTGTCAAAGGAAACCCAGGTCCCGAAACCATTAGTAGCTGGTTTAAGATTGAGGAGTTTTGTGGTAGTGGT......------------TTTTACAAGCTTGTTTTCTGTCCCACCGTTTGTGGTTCC...---...---------TGCAAAGTAAAATGCGGAGATGTGGGCATTTACATTGAT---CAGAAGGGAAGAAGGCGTTTGGCTCTCAGCGAT------AAACCATTCGCATTCGAGTTCAACAAA |
| API8_SOLTU/39-219 | CCGGTACTTGACACAAATGGTAAAGAACTCAATCCTGATTCGAGTTATCGCATTATTTCCATTGGTAGGGGTGCCTTAGGTGGTGATGTATACCTAGGAAAGTCCCCAAATTCAGATGCCCCT---TGTCCAGATGGCGTATTCCGTTACAATTCCGATGTTGGACCT......AGCGGTACACCCGTTAGATTCATTCCT---------------TTATCTGGAGGTATATTTGAAGATCAACTACTCAACATACAATTCAATATTCCAACAGTGAAATTGTGTGTTAGT------...TATACAATTTGGAAAGTCGGAAATCTAAATGCATATTTTAGGACGATGTTGTTGGAGACGGGAGGAACCATAGGG------------CAAGCAGATAGCAGCTATTTCAAGATTGTTAAATTATCAAATTTTGGT......---------------TACAACTTATTGTATTGCCCTATTACTCCCCCTTTTcttTGTccaTTTTGTCGTGATGATAACTTCTGTGCAAAGGTGGGTGTAGTTATTCAAAATGGAAAAAGG------CGTTTGGCTCTTGTCAACGAA---AATCCTCTTGATGTCTTATTCCAGGAA |
| ITRA_SOYBN/26-199 | TTCGTGCTCGATAATGAAGGTAACCCTCTTGAAAATGGTGGCACATATTATATCTTGTCAGACATAACAGCATTTGGTGGA---------------ATAAGAGCAGCCCCAACGGGAAATGAAAGATGCCCTCTCACTGTGGTGCAATCTCGCAATGAGCTCGAC---......AAAGGGATTGGAACAATCATCTCGTCCCCATATCGAATCCGTTTTATCGCCGAAGGCCATCCTTTGAGCCTTAAGTTCGATTCATTTGCAGTTATAATGCTGTGTGTTGGAATTCCTACC---...------GAGTGGTCTGTTGTGGAGGATCTACCAGAA---GGACCT---GCTGTTAAAATTGGTGAGAACAAAGAT---------GCAATG------GATGGTTGGTTTAGACTTGAGAGAGTTTCTGAT------......GATGAATTCAATAACTATAAGCTTGTGTTCTGTCCACAGCAAGCTGAG---...---...------------GATGACAAATGTGGGGATATTGGGATTAGTATTGATCATGATGATGGAACCAGGCGTTTGGTGGTGTCTAAGAAC---AAACCGTTAGTGGTTCAGTTTCAAAAA |
| ICW3_PSOTE/27-198 | GATTTGGTCGATGCTGAAGGTAACTTAGTTGAAAATGGTGGCACATACTATCTGTTGCCACATATATGGGCACACGGGGGAGGA------------ATAGAAACAGCAAAAACAGGAAACGAACCATGCCCTCTAACAGTGGTACGATCTCCCAATGAGGTCTCT---......AAAGGGGAACCAATAAGGATCTCATCCCAATTCCTTTCATTGTTCATCCCCAGAGGC---------TCTCTAGTGGCTCTTGGATTCGCTAACCCTCCATCTTGTGCAGCTTCTCCG------...------TGGTGGACTGTTGTTGACTCTCCACAAGGA------CCC---GCTGTTAAACTTAGTCAGCAAAAACTT---------CCGGAAAAGGATATTCTAGTGTTTAAATTCGAGAAAGTTTCCCAT------......TCTAACATTCACGTGTACAAGCTTTTGTACTGTCAACATGACGAAGAG---...---...---------GATGTGAAGTGTGATCAGTATATCGGGATTCATAGGGAT---CGCAATGGAAACAGACGTTTGGTGGTGACTGAGGAA---AACCCATTAGAGCTTGTGCTTCTGAAA |
| ITRY_ACACO/2-171 | GAACTTCTGGACGCAGACGGGGACATTTTAAGAAATGGAGGTGCATACTATATACTTCCAGCTTTGAGAGGAAAGGGTGGTGGC------------CTTACACTTGCCAAAACTGGAGACGAAAGCTGCCCTCTCACCGTGGTCCAAGCTCAGTCGGAGACTAAA---......AGAGGTTTGCCGGCAGTGATCTGGACCCCACCTAAAATTGCAATTCTCACACCAGGG---------TTTTACCTAAACTTTGAATTTCAACCAAGAGATCTACCCGCTTGCCTCCAGAAATATtctACATTACCGTGGAAGGTTGAGGGAGAATCACAAGAA---------------GTGAAGATTGCACCTAAGGAGAAA---------GAACAGTTCCTAGTTGGGTCATTTAAAATCAAGCCATACAGA---------......GATGACTACAAG---------CTTGTTTACTGTGAAGGTAATAGTGATGAT...---...---------------GAAAGCTGTAAAGATCTGGGGATTTCCATTGAC---GATGAGAACAACAGACGTTTGGTTGTGAAGGATGGA---CACCCACTCGCTGTTCGGTTCGAAAAG |