EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00194 - Carb_anhydrase)
Eukaryotic-type carbonic anhydrase
(Pfam reference: accession no. PF00194)
(Interpro reference: accession no. IPR001148)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
14 sequences @ 286 aa
(ave. pairwise identity: 0.48)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.42)
nucleotides
(available for above)
11 sequences @ 858 bp
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 3.68)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 286 aa
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 4.73)