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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00190 - Cupin_1)
Cupin
(Pfam reference: accession no. PF00190)
(Interpro reference: accession no. IPR006045)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
226 sequences @ 379 aa
(ave. pairwise identity: 0.22)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 102.72)
nucleotides
(available for above)
225 sequences @ 1137 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 77.60)
amino acids, restricted set
(corresp. to available nt seqs)
225 sequences @ 379 aa
(ave. pairwise identity: 0.22)
New Hampshire format
(total tree length: 102.57)