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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00181 alignment
(62 sequences with 94 aa)


Q9Y7P4_SCHPO/50-128 GRNET-GRITVRHQGGGHKQ.RIRLVDFER.KVPG......V-HRVIRIEYDPGRSGHIALVEKLNSETANKS.....YILACDGLREGDTVES
RML2_YEAST/132-208 GRNNS-GKITVRHQGGGHRN.RTRLIDFNR.WEGG......A-QTVQRIEYDPGRSSHIALLKHN--TTGELS.....YIIACDGLRPGDVVES
RK2_NEPOL/42-118 GRNHS-GSITTRWRGGGHKR.LYRQIDFRR.DKVG......VLARVATVEYDPNRSARIALLHYQD---GSKR.....YILHPQGLAIGAEVMS
RL2_MYCBO/42-119 GRNAH-GRITTRHKGGGHKR.AYRMIDFRRnDKDG......VNAKVAHIEYDPNRTARIALLHYLD---GEKR.....YIIAPNGLSQGDVVES
RL2_THEMA/42-118 GRNHH-GRVTVRHRGGGHKR.RYRIIDFKRyDKAG......IPAKVLAIEYDPNRSARIALLLYAD---GEKR.....YILAPKGVNVGDTLM-
RL2_SYNY3/42-118 GRNNR-GVITSRHRGGGHKK.LYRIIDFKR.NKQN......IPARVAAIEYDPNRNARIALLFYTD---GEKR.....YILAPAGLQVGMTVIA
RL2_DEIRA/41-117 GRNNR-GRITSRFIGGGHKR.LYRIIDFKRrDKSG......VNAKVAAIEYDPNRSARIALLHYAD---GEKR.....YILAPEGLTVGATVN-
RK2_ODOSI/42-118 GRNNR-GVITIRHRGGGHKR.RYRIIDFGR.KKHN......VEGVVAAIEYDPNRNARIALLHYTD---GEKR.....YILHPNNLNVGDRVVS
RL2_AQUPY/57-134 GRSRQRGNITARHRGGGHKK.LYRIIDFER.DKSL......VPAKVVSIEYDPFRSARICLLHYAD---GEKR.....YIIWPEGLKVGDTVMS
RK2_PROWI/42-118 GRNNK-GRITTRHRGGGHKR.LYREIDFIR.NKIG......TSAIVKSIEYDPNRTARIALVCYKD---GEKR.....YILSPTGLKVGEMVIA
RK2_GUITH/42-118 GRNNR-GLITVRHKGGGHKQ.RYRLVDFKR.NKLD......IPAIVASVEYDPNRNARIALLHYQD---GEKR.....YILHPKKLAVGDKIYS
RK2_CYAPA/42-118 GRNNR-GIITTAHKGGGSKR.LYRIIDFKR.DLKL......VPAKVAAIEYDPNRNARIALLHYQN---GEKG.....YILHARGLAVGNMVYS
RL2_CLOAB/42-118 GRNNN-GKITVRHRGGGNRN.KYRLIDFKR.NKDG......VPAKVTTIEYDPNRSAYIALVVYAD---GEKR.....YIIAPTKLSVGDTVVS
RL2_ASTYP/42-118 GRNNQ-GKITVRHRGGGVKR.KYRLIDFKR.NKDN......IVGKVATIEYDPNRSANIALIHYLD---GEKR.....YILAPKGLTVGMQIVS
RK2_CYACA/43-119 GRNNQ-GKITCRHKGGGHKR.KYRLVDFKR.CKTG......VLAKVSDIYYDPNRSAHIALLNYLD---GEKS.....YIISPNLLKVGTYVVS
RL2_HELPJ/42-118 GRNNN-GRITSRHKERGAKK.LYRIIDFKR.NKYN......IEGKVAAIEYDPYRNARIALVVYPD---GDKR.....YILQPSGLKVGDSVIA
RL2_XYLFA/42-118 GRNHH-GRITVRHIGGGCKQ.RYRVIDFKR.DKEA......IPARVERIEYDPNRTAHIALLCYVD---GERC.....YIIAPKGLKEGDKIIS
RL2_NEIMB/42-118 GRNNN-GHITTRHKGGGHKH.HYRVVDFKR.NKDG......IPAKVERIEYDPNRTAFIALLCYAD---GERR.....YIIAPRGIQAGAVLVS
RL2_CHLTR/53-128 GRDNL-GHISCRHRGGGVRR.HYRVIDFKR.NKDG......IEAKVASVEYDPNRSAYIALLNYVD---GEKR.....YILAPKGIKRGDRVI-
RL2_BORBU/43-119 GRDSS-GRISIRRRGGGHKR.KYRLIDFNRrDKFS......IPARVASIEYDPNRSANIALLVYKD---GEKR.....YIISPKGIKVGDVLE-
RL2_TREPA/42-117 GRGAG-GRISVRHRGGGHKR.RYRDIDFKR.DLHD......IPGTVKTIEYDPNRSVNIALVFYAN---GQKR.....YILAPKGLKVGQQVV-
RL2_MYCCA/44-120 GRNKS-GLISSRHKGGGHKQ.KYRIIDFKR.NKRD......IFGTISTIEYDPNRNAFICLVNYVD---GEKR.....YILFAKGMQVGMKVVA
RK2_EUGGR/42-118 GRNSR-GVITCRTLGGGHKR.LYRRIEFKR.NKLG......ILGKVISIEYDPNRNARIALIYYKN---GDKS.....YIIHPFDLCVGNNIIS
Q9G871_9EUKA/40-116 GHNNK-GRITIYNRGGGHKQ.RYRKIDFKR.SLIN......IPAMVIRIEYDPNRTANIALICYRN---GILS.....YILAPNGLKVGSIIKS
RL2_RICPR/42-118 GRNQQ-GRITSWHRGGGHKK.LYRVIDFKR.KKID......ISAIVERIEYDPNRTAFIALIKYD---DGEYS.....YILAPQKLSIGDRVIS
RM02_RECAM/42-118 GRNNT-GRITVYHRGGGHKT.KYRYIDFKR.SNYN......IPGIVERLEYDPNRTCFIALIKDN---ENNFS.....YILAPHDLKVGDTVIT
RL2_CAUCR/42-118 GRGGN-GRIAVRFRGGGAKR.LYRLVDFKR.RKQG......VATVVR-LEYDPNRTAFIALIKYQA--DGELA.....YILAPQRLKAGDEVVT
RL2_MYCGA/44-121 GRNNQ-GKITVRHRGGGSKR.KYRIIDFKRnLHDD......KIALVKSIEYDPNRSAFISLIAYEN---GYRS.....YILTPQGIKVGDKVVS
RL2_LEPIN/42-116 GRGDG-GKIAVRHKGGRVKR.KYRIIDFKR.RKAN......IPAVVKSLEYDPNRSAFISLICYKD---GEYS.....YILAPDGIKVGDTV--
RK2_WHEAT/40-116 GRNSR-GIITASIEGEVIKR.LYRKIDFRR.NQKD......ISGRIVTIESDPNRNAYICLIHYGD---GEKR.....YILHPRGAIIGDTIVS
RK2_SPIMX/42-118 GRNNR-GVITSRHRGGGHKR.LYRDIDFRR.DKQG......VNGTILTIEYDPNRNARICLTSYED---GEKR.....YILHSRGVMIGNQILS
RK2_PICAB/42-118 SRNGR-GIITARHRGGGHKR.LYRQIDFRR.DKEH......ISGKIVTIEYDPNRSAYICKVHYKN---GDKM.....YILHPRGVMIGDTILS
RM02_ACACA/23-99 GRNNQ-GRITRYHRGGGVKR.MGRLIDYKR.YIWN......IFGFVHRVEYDPKRNSLIALIVYSN---GVMS.....YILAPEGLLVGDCIFA
Q9T235_PHYIN/42-116 GKNNQ-GKITVRHRGGGHKR.LYRIINFNR.S-KN......IEGYVIKILYDPNRSANIAYIK-KD---SKSY.....LILAPEGLKINQYIKS
Q9AIN6_CARRU/16-91 GRSF--GKISTRHIGNFHKK.LYRKIDFFR.KKIN......IISYIERFDYDPNRNCYLALLKYID---GQKT.....YMLKTSEMKLNDKIII
Q9AIG2_CARRU/17-92 GRSR--GKISVRHIGKKHKK.FYRKIDFKR.DKSN......IKGIVESIHYDPNRNARIALIKYLD---GEKR.....YIIKTNNLEISNFVVS
Q9G8Q6_NAEGR/40-115 GRDNQ-GHITVYHKERGHKK.LYRLVDFYY.-LKD......IPYVVESLEYDPNRSGFINLVYYKN---GIYS.....FILATHNTFIGNVYMC
Q23888_DICDI/21-98 GRNK--GLIAIRSRGGALKR.KYRYIEHYKqKWMD......KWLFVMRIEYDPNRSAHIALCSILK--EGIYF.....YVISIAKLEVGSLIIT
Q9G4C8_9STRA/15-92 GRNNQ-GRITSRHRGGGHKR.KLLKIDFFR.KPSH......NSFKVLNFFYDPNRSCKVIIVHNVHT--FQPR.....IVLAPKGAFQGINLFD
Q9VTF8_DROME/68-147 GRDPVSGRLVAKGIGGGIKQ.QYRWVKWVRdGPTEg....aQEELVLEVLRDGCRTAKVALVAVGD----ELK.....YILATENMKAGDILKT
Q9D773_MOUSE/84-166 GRDHT-GRIRVHGIGGGHKQ.NYRMIDFLRfRPEKekapepFEEKVVVVRYDPCRSADIALVAGGS----RKR.....WIIATENMKAGDTILN
Q9MTE5_TOXGO/25-109 GRNNL-GFITCRAKGGGIKRnLYKILDSNFaNYGMs....fSSAFYVNIIYDSFRRIFLAVYFIIN-SIIKNIy...rYFLLTKNLKIGSQINF
Q9MG94_9STRA/43-118 GRSSITGNITVRHKGGGRKK.MYRKILKSY.--EN......SINLIIAILYDSTRNSFISIIFNPK----LKKl...nFILTTQNHSVGTVIE-
Q9G918_OCHDN/43-118 GRSASTGHITVWHKQRGKKY.LYRPIIKSN.EK--......AKSVIIGVSYDSNRTALTSINFDIL----KKKf...fNDIYTKDTYIGNIIN-
Q9TAJ4_CAFRO/21-96 GRNNS-GRITVRRRGGGHKR.SIRIINWTG.ELKN......--SLLIGVSYNPIKSGMLFQFINKE--SGEIF.....YQPATSKFSLLEGLNL
Q9XMU4_TETPY/41-117 GRSNK-GNIILRHRGGNIYN.KQINLNINR.NQIN......KLGIISSLNYLNKNSCFIGLIKYSN---NSLS.....YIKLSNGLFIGNYTKS
Q9SD27_ARATH/11-91 GAAGSVFKSHTHHRKG--PA.KFRSLDYGE.RNGY......LKGLVTEIIHDPGRGAPLARVAFRH---PFRYmkqkeLFVAAEGMYTGQYLYC
RL2_DICDI/11-91 GKAGSVFGAHTHHRKG--TP.RFRALDYAE.RQGY......VKGVVKEIIHDPGRGAPLARVVFKG---LTQFkldkqLFIAPEGMHTGQFVFA
RL2_SCHPO/11-89 --SGGIFQAHTRLRKG--AA.QLRTLDFAE.RHGY......IRGVVQKIIHDPGRGAPLAKVAFRN---PYHYrtdveTFVATEGMYTGQFVYC
Q9AW54_GUITH/11-90 G-SSRIFTSHTSGKKG--KV.KFRAYDKSE.KCGF......IKGTIKKIIHDPGRGCPVAKVQFEG---PYSYkksnySYLAVEGMFTGQNIFC
RL2_SULSO/11-81 GKGSPTFRNPGWLRIG--KV.RYPNIFG--.---H......FIGKVIDIVHNPGMNAPVALVKLEN---GTKF.....LMQAIQGLVVNQKIEF
RL2_PYRAB/11-85 GKGSPTFRSPSHRFRG--AV.KYIPLNYTQ.DK-T......LRGVVEEIMHDPGRTAPVARVRFEN---GMEK.....LIIAPEGLLVGQEIYI
RL2_AERPE/11-82 GRGTPTYRSRAHIHPG--PA.KYPPLSG--.D--T......LRGKVVELIHDPGRYVPLARVVRED---GVEF.....LMPAAEGMYVGQIIEI
RL2_METVA/11-86 GRGTPKYRSPSHKRKG--EV.KYRSYDEME.KVGK......VLGTVIDVLHDPGRSAPVAKVRFAN---GEER.....LVLIPEGISVGEQIEC
RL2_METTH/11-86 GRGTPTYRSASHRFKG--KI.KYRAYDSIE.SEGS......LKGKVVDIMHDPGRTAPVARVKFEN---GEER.....LILAPEALMLNEEVEC
RL2_HALSA/10-81 GRGTSTFRAPSHRYKA--EL.SHKRTEDT-.--DV......LAGEVIDVEHDPART-AVARVAFED---DDQR.....LVLASEGVGVGDTIEI
RL2_ARCFU/11-82 GKGTPTYRAPSHRYKT--DA.KLLRFKD--.--EV......VAAKVIDIQHDSARNGPVALVKLPD---GSET.....YILAVEGLGTGDVVYA
RL2_THEAC/11-78 GHGSLVYRSPSHRHIT----.EVKHVDQG-.----......-TYVIKDIIHAPGRNAPLLELMGSD---GKKA.....YQIAFTGAFVGQNIVA
RM02_PARTE/39-115 SRNNT-GKVSMRCKRKKFKN.LDLAINYAR.IEMG......RNCLITKLSFWKEKKPYVALVRDSY---NSLS.....YYIAPAGFFVGRTLKT
Q25807_PLAFA/18-102 GKNNK-GYITIYNKGGGNLKyNYKLIDSWYdNYNIt...inYKVFLFKKIKNYFRNTYIGCILYLSKLNNLQK.....FIILQHNYMINSIYYL
RM02_MARPO/273-345 GRVLRTSEPFTYILASENLEvGNTVMNFH-.---G......SKPSTLLNYHQPSQKANDPSGLRVE----ETA.....WDSQAWLHPRGDYAS-
RM02_ORYSA/275-347 VDRAPVTYILASHQLEAGN-.MVINCDCSKpSKSG......-FLRPAQNAHTYLRFQELGRTVNKG-------.....RVEGGSQLAASWPRPP