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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00179 phylogeny
for nucleotide alignment


 
(((((((((((((Q9TZ69_CAEEL/8-147,(UBC1_MOUSE/7-146,UBCD4_DROME/8-147)),UBC21_CAEEL/22-176),(Q43780_LYCES/6-143,O74810_SCHPO/8-144)),((Q9VJS5_DROME/7-142,Q9ZVA6_ARATH/9-147),UBC13_SCHPO/6-141)),((((UBCD2_DROME/90-225,Q9VQ00_DROME/25-160),Q9VYN3_DROME/66-201),(O48838_ARATH/33-171,(Q9Y165_DROME/341-479,((Q9VH01_DROME/4536-4692,Q9XZ32_DROME/1125-1274),UBE2S_HUMAN/15-152)))),((Q20617_CAEEL/17-156,((((UBE2M_MOUSE/33-168,Q9VSF3_DROME/30-165),(O74549_SCHPO/27-162,UBC12_YEAST/31-172)),Q9ZU75_ARATH/35-171),Q9XVK5_CAEEL/29-176)),(UB2L6_HUMAN/5-143,((UBC84_DROME/6-144,Q9VZ73_DROME/14-153),UB2L3_MOUSE/6-144))))),((Q18288_CAEEL/376-491,Q94490_DICDI/6-141),Q9UTN8_SCHPO/11-149)),((((Q9VGD6_DROME/17-152,(UBC6_ARATH/7-143,UBC5_ARATH/7-143)),UBE2H_MOUSE/10-145),Q95039_PARTE/244-382),(UBCX_YEAST/21-174,UBCX_PICAN/7-177))),(UBC11_YEAST/12-150,(UBC11_SCHPO/32-170,((UB2EC_SPISO/34-170,UBE2C_HUMAN/34-170),Q9VTY6_DROME/36-172)))),((((O77397_PLAF7/8-141,Q9U5Q3_9CILI/34-174),((UBC2_MEDSA/8-145,UBE2A_MOUSE/8-145),(UBC2_NEUCR/8-145,UBC2_YEAST/8-145))),(FTS1_MOUSE/72-217,Q9U1U4_CAEEL/19-167)),(UB2J2_MOUSE/16-153,Q9SHI7_ARATH/9-146))),((UBC3_YEAST/11-164,Q9VUR4_DROME/66-223),(((UB2G2_MOUSE/8-159,Q9U1Q1_CAEEL/8-159),(UBC7_SCHPO/9-160,UBC7_YEAST/8-159)),((UBC15_SCHPO/9-160,(UB2G1_RAT/9-161,Q9VFR8_DROME/9-160)),UBC13_ARATH/8-159)))),(Q20872_CAEEL/39-180,((((UBE2I_MESAU/8-152,UBC9_CAEEL/8-152),Q42551_ARATH/9-153),UBC3_SCHPO/8-152),UBC9_YEAST/8-152))),Q9XWF6_CAEEL/8-149),UBCY_ARATH/19-158,O23239_ARATH/19-158);
(((((((((((((Q9TZ69_CAEEL/8-147:0.21194,(UBC1_MOUSE/7-146:0.21167,UBCD4_DROME/8-147:0.27290):0.14162):0.13128,UBC21_CAEEL/22-176:0.21039):0.07534,(Q43780_LYCES/6-143:0.27734,O74810_SCHPO/8-144:0.39456):0.11603):0.17382,((Q9VJS5_DROME/7-142:0.20276,Q9ZVA6_ARATH/9-147:0.22933):0.04766,UBC13_SCHPO/6-141:0.29179):0.17547):0.08893,((((UBCD2_DROME/90-225:0.13863,Q9VQ00_DROME/25-160:0.18757):0.13612,Q9VYN3_DROME/66-201:0.34011):0.17273,(O48838_ARATH/33-171:0.60943,(Q9Y165_DROME/341-479:0.43830,((Q9VH01_DROME/4536-4692:0.44642,Q9XZ32_DROME/1125-1274:0.46556):0.35124,UBE2S_HUMAN/15-152:0.36076):0.10738):0.10793):0.03532):0.05003,((Q20617_CAEEL/17-156:0.58067,((((UBE2M_MOUSE/33-168:0.19890,Q9VSF3_DROME/30-165:0.14308):0.07393,(O74549_SCHPO/27-162:0.28034,UBC12_YEAST/31-172:0.41318):0.17085):0.08496,Q9ZU75_ARATH/35-171:0.24426):0.20979,Q9XVK5_CAEEL/29-176:0.52501):0.08903):0.09153,(UB2L6_HUMAN/5-143:0.24034,((UBC84_DROME/6-144:0.22918,Q9VZ73_DROME/14-153:0.45875):0.10542,UB2L3_MOUSE/6-144:0.19771):0.09640):0.21290):0.11177):0.12282):0.03920,((Q18288_CAEEL/376-491:0.43932,Q94490_DICDI/6-141:0.33803):0.07879,Q9UTN8_SCHPO/11-149:0.47999):0.07696):0.05365,((((Q9VGD6_DROME/17-152:0.60126,(UBC6_ARATH/7-143:0.12822,UBC5_ARATH/7-143:0.10183):0.15253):0.08342,UBE2H_MOUSE/10-145:0.25770):0.23553,Q95039_PARTE/244-382:0.50376):0.13980,(UBCX_YEAST/21-174:0.47121,UBCX_PICAN/7-177:0.34481):0.26006):0.06960):0.04082,(UBC11_YEAST/12-150:0.25844,(UBC11_SCHPO/32-170:0.29584,((UB2EC_SPISO/34-170:0.22103,UBE2C_HUMAN/34-170:0.20269):0.09623,Q9VTY6_DROME/36-172:0.23835):0.18164):0.08476):0.23133):0.06615,((((O77397_PLAF7/8-141:0.28850,Q9U5Q3_9CILI/34-174:0.26227):0.07899,((UBC2_MEDSA/8-145:0.19514,UBE2A_MOUSE/8-145:0.24094):0.12527,(UBC2_NEUCR/8-145:0.26718,UBC2_YEAST/8-145:0.16076):0.12025):0.04243):0.09812,(FTS1_MOUSE/72-217:0.53900,Q9U1U4_CAEEL/19-167:0.34469):0.49497):0.01696,(UB2J2_MOUSE/16-153:0.35107,Q9SHI7_ARATH/9-146:0.24922):0.52181):0.06910):0.05893,((UBC3_YEAST/11-164:0.41733,Q9VUR4_DROME/66-223:0.47150):0.10141,(((UB2G2_MOUSE/8-159:0.21609,Q9U1Q1_CAEEL/8-159:0.26713):0.10746,(UBC7_SCHPO/9-160:0.24776,UBC7_YEAST/8-159:0.31776):0.08905):0.11678,((UBC15_SCHPO/9-160:0.20894,(UB2G1_RAT/9-161:0.16978,Q9VFR8_DROME/9-160:0.28053):0.09330):0.06963,UBC13_ARATH/8-159:0.22016):0.07210):0.09110):0.09223):0.09163,(Q20872_CAEEL/39-180:0.66234,((((UBE2I_MESAU/8-152:0.19480,UBC9_CAEEL/8-152:0.20323):0.08515,Q42551_ARATH/9-153:0.31010):0.11430,UBC3_SCHPO/8-152:0.22956):0.05567,UBC9_YEAST/8-152:0.24672):0.11782):0.15162):0.35621,Q9XWF6_CAEEL/8-149:0.39110):0.20954,UBCY_ARATH/19-158:0.07917,O23239_ARATH/19-158:0.23983);