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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00179 phylogeny
for amino acid alignment


 
((((((((Q95039_PARTE/244-382,((UBCY_ARATH/19-158,O23239_ARATH/19-158),Q9XWF6_CAEEL/8-149)),((UBE2S_HUMAN/15-152,((Q9VJS5_DROME/7-142,Q9ZVA6_ARATH/9-147),UBC13_SCHPO/6-141)),(O74810_SCHPO/8-144,(Q43780_LYCES/6-143,((Q9TZ69_CAEEL/8-147,UBC21_CAEEL/22-176),(UBC1_MOUSE/7-146,UBCD4_DROME/8-147)))))),Q18288_CAEEL/376-491),((Q9UTN8_SCHPO/11-149,((UBCD2_DROME/90-225,Q9VQ00_DROME/25-160),Q9VYN3_DROME/66-201)),Q94490_DICDI/6-141)),(Q9Y165_DROME/341-479,(((((UBC15_SCHPO/9-160,(UB2G1_RAT/9-161,Q9VFR8_DROME/9-160)),((Q9VUR4_DROME/66-223,UBC3_YEAST/11-164),(UBC13_ARATH/8-159,UBC7_WHEAT/11-161))),(UBC7_YEAST/8-159,(UBC7_SCHPO/9-160,(UB2G2_MOUSE/8-159,Q9U1Q1_CAEEL/8-159)))),((O77397_PLAF7/8-141,(Q9U5Q3_9CILI/34-174,((UBC2_MEDSA/8-145,UBE2A_MOUSE/8-145),(UBC2_NEUCR/8-145,UBC2_YEAST/8-145)))),(Q20872_CAEEL/39-180,(((UBE2I_MESAU/8-152,UBC9_CAEEL/8-152),Q42551_ARATH/9-153),(UBC9_YEAST/8-152,UBC3_SCHPO/8-152))))),(((FTS1_MOUSE/72-217,Q9U1U4_CAEEL/19-167),((((Q9VTY6_DROME/36-172,UBE2C_HUMAN/34-170),UB2EC_SPISO/34-170),UBC11_SCHPO/32-170),UBC11_YEAST/12-150)),((((O74549_SCHPO/27-162,(UBC12_YEAST/31-172,((UBE2M_MOUSE/33-168,Q9VSF3_DROME/30-165),Q9ZU75_ARATH/35-171))),Q9XVK5_CAEEL/29-176),((UBE2H_MOUSE/10-145,((UBC6_ARATH/7-143,UBC5_ARATH/7-143),UBC8_YEAST/7-143)),Q9VGD6_DROME/17-152)),(UBCX_YEAST/21-174,UBCX_PICAN/7-177)))))),((Q9VH01_DROME/4536-4692,(Q9XZ32_DROME/1125-1274,P93012_ARATH/15-164)),(Q20617_CAEEL/17-156,(UB2L6_HUMAN/5-143,((UBC84_DROME/6-144,Q9VZ73_DROME/14-153),UB2L3_MOUSE/6-144))))),O48838_ARATH/33-171),UB2J2_MOUSE/16-153,Q9SHI7_ARATH/9-146);
((((((((Q95039_PARTE/244-382:0.82425,((UBCY_ARATH/19-158:0.01061,O23239_ARATH/19-158:0.22437):0.28883,Q9XWF6_CAEEL/8-149:0.37117):0.75906):0.05226,((UBE2S_HUMAN/15-152:0.73968,((Q9VJS5_DROME/7-142:0.20483,Q9ZVA6_ARATH/9-147:0.13436):0.11332,UBC13_SCHPO/6-141:0.21424):0.21171):0.17065,(O74810_SCHPO/8-144:0.35162,(Q43780_LYCES/6-143:0.28487,((Q9TZ69_CAEEL/8-147:0.20929,UBC21_CAEEL/22-176:0.28680):0.11670,(UBC1_MOUSE/7-146:0.10734,UBCD4_DROME/8-147:0.18014):0.21238):0.15123):0.10510):0.16777):0.10695):0.01590,Q18288_CAEEL/376-491:0.61886):0.04828,((Q9UTN8_SCHPO/11-149:0.61032,((UBCD2_DROME/90-225:0.09695,Q9VQ00_DROME/25-160:0.24567):0.19838,Q9VYN3_DROME/66-201:0.39634):0.08822):0.11678,Q94490_DICDI/6-141:0.46194):0.06993):0.08870,(Q9Y165_DROME/341-479:0.81714,(((((UBC15_SCHPO/9-160:0.14842,(UB2G1_RAT/9-161:0.13675,Q9VFR8_DROME/9-160:0.10533):0.12788):0.05427,((Q9VUR4_DROME/66-223:0.44795,UBC3_YEAST/11-164:0.58000):0.15592,(UBC13_ARATH/8-159:0.06572,UBC7_WHEAT/11-161:0.22527):0.15839):0.00334):0.11563,(UBC7_YEAST/8-159:0.28190,(UBC7_SCHPO/9-160:0.23897,(UB2G2_MOUSE/8-159:0.10230,Q9U1Q1_CAEEL/8-159:0.17081):0.09611):0.11827):0.14315):0.27670,((O77397_PLAF7/8-141:0.45273,(Q9U5Q3_9CILI/34-174:0.31208,((UBC2_MEDSA/8-145:0.16477,UBE2A_MOUSE/8-145:0.11128):0.11112,(UBC2_NEUCR/8-145:0.12354,UBC2_YEAST/8-145:0.14439):0.11116):0.10616):0.08124):0.17962,(Q20872_CAEEL/39-180:0.97599,(((UBE2I_MESAU/8-152:0.10469,UBC9_CAEEL/8-152:0.17406):0.12967,Q42551_ARATH/9-153:0.30819):0.06875,(UBC9_YEAST/8-152:0.34610,UBC3_SCHPO/8-152:0.16553):0.05798):0.18258):0.32263):0.05230):0.08590,(((FTS1_MOUSE/72-217:0.65895,Q9U1U4_CAEEL/19-167:0.45232):0.96803,((((Q9VTY6_DROME/36-172:0.26417,UBE2C_HUMAN/34-170:0.17039):0.08478,UB2EC_SPISO/34-170:0.13581):0.15296,UBC11_SCHPO/32-170:0.16361):0.12563,UBC11_YEAST/12-150:0.21700):0.34088):0.07767,((((O74549_SCHPO/27-162:0.25375,(UBC12_YEAST/31-172:0.59058,((UBE2M_MOUSE/33-168:0.12203,Q9VSF3_DROME/30-165:0.13883):0.07787,Q9ZU75_ARATH/35-171:0.24767):0.19845):0.06628):0.29842,Q9XVK5_CAEEL/29-176:0.72669):0.33481,((UBE2H_MOUSE/10-145:0.26455,((UBC6_ARATH/7-143:0.15019,UBC5_ARATH/7-143:0.07388):0.17915,UBC8_YEAST/7-143:0.24428):0.07961):0.26729,Q9VGD6_DROME/17-152:0.61380):0.39583):0.11611,(UBCX_YEAST/21-174:0.72568,UBCX_PICAN/7-177:0.36455):0.54097):0.19106):0.02067):0.13210):0.02751):0.11021,((Q9VH01_DROME/4536-4692:0.42861,(Q9XZ32_DROME/1125-1274:0.42579,P93012_ARATH/15-164:0.42019):0.29954):0.89325,(Q20617_CAEEL/17-156:1.00409,(UB2L6_HUMAN/5-143:0.36405,((UBC84_DROME/6-144:0.25830,Q9VZ73_DROME/14-153:0.69643):0.10396,UB2L3_MOUSE/6-144:0.11645):0.17791):0.21576):0.15682):0.15865):0.18190,O48838_ARATH/33-171:0.56835):0.94794,UB2J2_MOUSE/16-153:0.43478,Q9SHI7_ARATH/9-146:0.15878);