EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00160 alignment
(20 sequences with 573 bp)


NKTR_HUMAN/8-176 CAGTGCCACTTCGACATCGAGATCAACCGGGAGCCGGTTGGTCGCATTATGTTTCAGCTCTTCTCAGACATATGTCCAAAAACATGCAAAAACTTCCTTTGCTTGTGC...TCAGGAGAGAAAGGCCTTGGGaaaacaACTGGGAAGAAGTTATGTTATAAAGGTTCTACGTTCCATCGTGTGGTTAAAAACTTTATGATTCAGGGTGGGGACTTCAGTGAAGGTAATGGAAAAGGTGGAGAATCAATTTATGGTGGATAT---..................---TTTAAAGATGAAAACTTTATTCTCAAACATGACAGAGCGTTCCTTTTATCAATGGCAAATCGAGGG...AAACATACCAATGGTTCCCAGTTTTTCATTACCACAAAG...CCTGCTCCACACCTGGATGGG...............GTGCATGTAGTCTTTGGACTGGTTATT------TCTGGTTTTGAAGTAATCGAACAAATTGAAAATCTGAAGACCGATGCTGCAAGC------------AGACCATATGCAGATGTGCGAGTTATTGACTGTGGAGTACTT
PPIF_HUMAN/47-206 CTCGTGTACCTGGACGTGGACGCCAACGGGAAGCCGCTCGGCCGCGTGGTGCTGGAGCTGAAGGCAGATGTCGTCCCAAAGACAGCTGAGAACTTCAGAGCCCTGTGC...ACTGGTGAGAAGGGCTTCGGC......------------------TACAAAGGCTCCACCTTCCACAGGGTGATCCCTTCCTTCATGTGCCAGGCGGGCGACTTCACCAACCACAATGGCACAGGCGGGAAGTCCATCTACGGAAGCCGC---..................---TTTCCTGACGAGAACTTTACACTGAAGCACGTGGGGCCAGGTGTCCTGTCCATGGCTAATGCTGGT...CCTAACACCAACGGCTCCCAGTTCTTCATCTGCACCATA...AAGACAGACTGGTTGGATGGC...............AAGCATGTTGTGTTCGGTCACGTCAAA------GAGGGCATGGACGTCGTGAAGAAAATAGAATCTTTCGGCTCTAAGAGTGGG---------------AGGACATCCAAGAAGATTGTCATCACAGACTGTGGCCAGTTG
CYPH_MAIZE/5-171 CGCGTCTTCTTCGACATGACCGTCGGCGGCGCCCCGGCGGGCCGGATCGTGATGGAGCTGTACGCCAACGAGGTGCCCAAGACCGCGGAGAACTTCCGCGCGCTGTGC...ACGGGCGAGAAGGGCGTGGGCaag...TCCGGGAAGCCGCTCCACTACAAGGGCTCCACCTTCCACCGCGTCATCCCCGAGTTCATGTGCCAGGGCGGCGACTTCACCCGCGGCAACGGCACCGGCGGCGAGTCCATCTACGGCGAGAAG---..................---TTCCCCGACGAGAAGTTCGTGCGCAAGCAACCCGCCCCCGGTGTGCTCTCCATGGCCAACGCCGGG...CCCAACACCAACGGCTCCCAGTTCTTCATCTGCACCGTC...GCGACCCCTTGGCTCGACGGC...............AAGCACGTCGTCTTCGGCCAGGTCGTC------GAGGGCATGGACGTCGTCAAGGCCATCGAGAAGGTGGGCACCCGCAACGGC---------------TCCACCTCCAAGGTGGTCAAGGTCGCTGACTGCGGACAGCTC
CYPH_BRANA/5-171 AAAGTTTATTTCGACATGACCGTTGGCGACAAAGCCGCCGGCCGCATCGTGATGGAGCTTTACGCCGACACAGTCCCCGAGACGGCCGAGAACTTCCGTGCTCTCTGC...ACCGGCGAGAGAGGAATCGGCaaa...TCCGGAAAGCCACTCCACTACAAGGGCTCGGCTTTCCACCGCGTGATCCCCAAGTTCATGTGCCAAGGAGGAGATTTCACCGCCGGGAACGGAACGGGAGGAGAGTCGATCTACGGCATGAAG---..................---TTCAAAGACGAGAACTTTGTCAAGAAGCACACCGGTCCGGGTATTCTCTCCATGCGTAACGCTGGT...TCGAACACGAACGGATCTCAGTTTTTCATTTGCACTGAG...AAGACATCGTGGCTCGACGGG...............AAGCATGTTGTGTTCGGTCAAGTTGTC------GAAGGGATGGATGTCGTTAGAGACATTGAGAAGGTTGGATCTGACAGTGGA---------------AGGACTTCTAAGAAGGTTGTGACCTGTGACTGTGGTCAGCTT
CYP1_ARATH/5-171 AAGGTATACTTCGACATGACCATCGACGGCCAGCCCGCGGGAAGGATCGTGATGGAGCTGTACACCGATAAGACTCCCAGGACTGCCGAGAATTTCAGAGCTCTCTGC...ACCGGAGAGAAAGGTGTTGGCggt...ACCGGAAAACCCCTTCACTTCAAGGGATCTAAGTTTCACCGTGTGATCCCTAACTTCATGTGCCAGGGAGGAGATTTCACCGCCGGGAACGGAACAGGCGGTGAGTCGATCTACGGGAGCAAG---..................---TTCGAGGACGAGAATTTCGAGAGGAAGCACACCGGACCGGGGATCCTGTCGATGGCGAACGCCGGT...GCAAACACGAACGGATCTCAGTTCTTCATCTGCACCGTG...AAGACCGATTGGCTTGATGGG...............AAGCACGTGGTGTTTGGGCAGGTCGTG------GAAGGCTTAGACGTGGTAAAGGCCATCGAGAAGGTTGGATCATCATCTGGA---------------AAGCCGACGAAGCCTGTGGTTGTTGCCGATTGTGGTCAGCTC
CYPH_ECHGR/4-162 AAGTGCTTCTTCGACATCTCCATTGGCGGTAAGCCAGCGGGTCGCATCGTCTTTGCCCTGTTTGATGAC---GTCCCAAAGACAGTAGAGAACTTCCGTGCACTGTGC...ACCGGTGAGAAGGGTTTCGGA......------------------TACAAGGGCTCGAAGTTTCACCGAATTATTCCCGGTTTTATGTGCCAAGGTGGTGATTTTACTGCCGGGAATGGTACCGGTGGCAAGAGCATATACGGGAGCAAA---..................---TTTGAGGATGAAAATTTCAATCACAAGCACAGCAAGCCGATGATGCTCTCGATGGCGAATGCGGGT...AAGAACACCAATGGCTCGCAATTCTTCATCACTACCGCC...GTCACCAGCTGGCTTGATGGG...............AAGCATGTTGTCTTTGGTGAGGTAGAA------AGTGGCGAAGATGTTGTTAAGGATATGGAGGCCGTCGGTAGCAGTAGTGGC---------------AAGACTTCCCAAGAAGTACTGATTACTGACTGCGGTCAGCTG
CYP2_ARATH/3-169 CATTGTTTCTTTGATATGACTATCGGCGGGCAACCTGCAGGTCGAATCATCATGGAACTATTTCCCGAT---GTCCCCAAAACGGCCGAGAACTTCCGAGCTTTGTGC...ACGGGCGAAAAGGGAATCGGGccg...TCCGGGAAAAAGATGACTTACGAGGGGAGCGTTTTCCACCGTGTTATCCCAAAATTCATGCTCCAGGGTGGCGATTTCACTCTAGGAAACGGACGTGGCGGCGAGTCGATCTATGGCGCCAAG---..................---TTTGCCGATGAGAATTTCATTCACAAGCATACTACACCGGGTCTACTCTCCATGGCCAACGCAGGT...CCAGGAACCAATGGCTCGCAGTTCTTCATCACCACTGTG...GCTACGCCCCACTTGGATGGC...............AAGCACGTCGTATTTGGGAAGGTCGTC------GAGGGCATGGACGTTGTGAGGAAGATTGAGGCCACACAAACCGATCGGGGCGAT------------AAACCACTGTCAGAAGTAAAGATTGCTAAGTGTGGCCAGCTC
PPIA_STRCH/4-165 AAGGTCTACTTCGACATCACCATCGACGACGCGCCCGCAGGGCGTATCACGTTCAACCTGTTCGACGACGTCGTCCCCAAGACGGCGGAGAACTTCCGCGCGCTCGCC...ACCGGCGAGAAGGGCTTCGGC......------------------TACGCCGGCTCGTCCTTCCACCGCGTCATCACGGACTTCATGCTCCAGGGCGGCGACTTCACCCGCGGTGACGGCACCGGCGGCAAGAGCATCTACGGCGAGAAG---..................---TTCGCCGACGAGAACTTCCAGCTCAAGCACGACCGTGTGGGCCTGCTCTCGATGGCCAACGCCGGA...AAGAACACCAACGGTTCGCAGTTCTTCATCACCACGGTG...CTCACCCCGTGGCTGGACGGC...............AAGCACGTGGTCTTCGGCGAGGTCGCCGACGACGACAGCATGGCCCTGGTCCGCAAGATCGAGGCGCTCGGCTCCTCTAGCGGC---------------CGCACCAGCGCCAAGGTCACCATCGCCGAGTCCGGCGCTCTC
CYPH_SCHPO/3-162 AACTGCTTTTTTGACGTTATTGCCAACGGCCAACCTTTAGGACGTATCGTCTTCAAATTATTCGACGATGTCGTTCCCAAGACTGCTGCTAACTTCCGTGCTCTCTGC...ACCGGCGAGAAGGGCTATGGC......------------------TATGCTGGCTCCACCTTCCACCGTGTCATTCCCCAATTCATGCTCCAAGGTGGTGATTTCACTCGCGGTAACGGTACCGGTGGAAAGTCCATTTATGGCGAGAAA---..................---TTTCCTGATGAAAACTTTGCCTTGAAGCATAACAAGCCTGGTTTGTTGTCTATGGCCAACGCTGGT...CCTAACACCAACGGTTCTCAATTTTTCATTACCACCGTT...GTCACTCCCTGGTTAGATGGC...............AAGCATGTCGTTTTCGGTGAGGTCACT------GAGGGTATGGATGTTGTCAAGAAGGTTGAAAGCTTGGGTTCTAACTCTGGT---------------GCTACTCGTGCTCGCATTGTCATTGACAAGTGTGGTACCGTC
CYPH_CANAL/3-162 ACCGTTTACTTTGATGTCTCCGCTGATGGTCAAAAATTAGGAAAGATCACCTTCAAATTGTACGATGATGTCGTTCCAAAGACTGCTGAAAATTTCAGAGCTTTATGT...ACTGGTGAAAAAGGTTTTGGT......------------------TACAAAGGTTCTATTTTCCACAGAGTCATCCCACAATTCATGCTTCAAGGTGGTGACTTCACCAACTTTAACGGTACTGGTGGTAAAAGTATTTACGGTACCAAA---..................---TTTGCTGATGAAAACTTTGTCAAGAGACATGACAGACCAGGTTTGTTGTCTATGGCCAATGCTGGT...CCAAACACCAATGGTTCCCAATTCTTCATTACCACCGTT...CCATGCCCATGGTTGGATGGT...............AAACACGTTGTTTTCGGTGAAGTCACT------GATGGTTTAGACATTGTTAAAAAGATTGAATCTTTTGGTTCTGGCAGCGGT---------------GCTACTTCTAAGAAGATTGTCATTGAAGAATCTGGTCAATTG
CYPC_YEAST/23-182 AAAGTGTTCTTTGATCCTGCGGTCAATGGAACCAAAATCGGCAGAATAGAATTTGAATTATATGATAATGTGGTTCCTAAAACTGCTGAAAATTTCAGAGCCTTATGT...ACCGGCGAAAAGGGCTGGGGC......------------------TATAAAGGTGTCCCTTTCCACAGAATCATCCCAGACTTCATGATCCAAGGTGGTGACACTGATTTGACTAACGGTTTTGGGGGCAAATCCATTTACGGTTCCAAG---..................---TTCGCTGACGAAAATTTTGTCAAAAAGCATGACAAGGCAGGTTTGTTATCTATGGCAAATGCTGGA...CCAAACACTAACGGTTCTCAATTCTTCATTACCACTGTG...CCTTGTCCATGGTTGGATGGA...............AAACACGTTGTCTTTGGTGAGGTAACC------AAAGGTATGGACATTGTCAAAGCAATCGAATCATACGGTACTGCTTCTGGT---------------AAACCAAGAGCTGAAATCGTTATCGAAGAAGCTGGTGAGTTA
PPIC_HUMAN/39-199 AAGGTCTTCTTTGATGTGAGGATTGGAGACAAAGATGTTGGCAGAATTGTGATTGGCCTCTTTGGAAAAGTTGTGCCCAAGACAGTGGAAAATTTTGTTGCTCTAGCA...ACAGGAGAGAAAGGATATGGA......------------------TATAAAGGAAGCAAGTTTCATCGTGTCATCAAGGATTTCATGATTCAAGGAGGTGACATCACCACTGGAGATGGCACTGGGGGTGTGAGCATCTATGGTGAGACA---..................---TTTCCAGATGAGAACTTCAAGCTGAAGCACTATGGCATTGGGTGGGTCAGCATGGCCAACGCTGGG...CCTGACACCAATGGCTCTCAGTTCTTTATCACCTTGACC...AAGCCCACCTGGTTGGACGGC...............AAACATGTGGTGTTTGGAAAAGTCATT------GATGGGATGACAGTGGTGCACTCCATAGAGCTCCAAGCAACTGATGGGCATGAC------------CGTCCACTCACCAACTGCTCGATCATCAACAGTGGCAAGATA
PPIB_BOVIN/37-197 AAGGTGTACTTTGACCTGCGAATTGGAGATGAAGATATAGGCCGGGTGGTCATCGGTCTCTTTGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTGGCT...ACAGGAGAGAAAGGATTTGGC......------------------TACAAAGACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGAGATTTCACCCGGGGAGACGGCACTGGAGGTAAGAGCATCTACGGTGAACGC---..................---TTCCCCGATGAGAACTTCAAGCTTAAACACTATGGGCCCGGCTGGGTGAGCATGGCCAACGCGGGC...AAAGACACCAACGGCTCCCAGTTCTTCATCACGACAGTC...AAGACTGCCTGGCTAGATGGC...............AAGCACGTAGGTTTCGGCAAAGTTCTA------GAGGGCATGGATGTAGTACGGAAGGTAGAGAGCACCAAGACTGACGGTCGGGAC------------AAGCCTCTGAAGGACGTGACGATCGCAGACTGCGGCAAGATC
CYP4_ARATH/96-256 AAGGTTTACTTTGATGTGGAAATTGGAGGTGAAGTTGCTGGCAGAATTGTGATGGGTCTCTTTGGAGAAGTTGTGCCTAAAACCGTTGAAAACTTCCGTGCCTTGTGT...ACTGGTGAGAAGAAATACGGG......------------------TACAAGGGTTCCTCTTTCCATCGTATTATTAAGGATTTCATGATCCAAGGAGGTGATTTCACCGAGGGAAATGGTACTGGAGGTATTAGTATTTACGGTGCCAAG---..................---TTCGAAGATGAAAACTTCACCCTGAAGCATACTGGACCTGGAATCTTGAGCATGGCAAACGCTGGT...CCTAATACTAATGGAAGCCAGTTTTTCATTTGTACCGTC...AAGACTTCATGGTTAGATAAC...............AAGCATGTCGTGTTTGGACAAGTAATT------GAAGGTATGAAGCTTGTTAGGACTCTTGAGTCTCAAGAGACTCGCGCTTTCGAT------------GTTCCCAAGAAAGGTTGTAGAATCTATGCCTGCGGAGAGCTC
CYPD_YEAST/35-196 AAGGTCTACTTTGACATTAATCACGGTGATAAACAAATTGGTAGAATTGTTATGGGATTGTATGGTCTCACCACACCCCAAACCGTTGAAAACTTTTACCAGTTGACCattTCCAGGGACCCTAAGATGGGT......------------------TATTTGAACTCTATCTTCCATCGCGTTATTCCTAACTTCATGATTCAAGGTGGCGATTTCACTCACAGATCAGGTATTGGGGGTAAGTCTATCTTCGGAAACACG---..................---TTCAAAGATGAGAATTTTGATGTCAAACATGACAAACCAGGCAGATTGTCTATGGCCAATCGTGGT...AAAAACACCAACGGATCCCAATTTTTCATCACCACCGTC...CCATGCCCATGGTTGGACGGT...............AAGCACGTTGTCTTTGGAGAAGTCTTG------GATGGTATGGACGTAGTTCACTACATTGAAAACGTTAAGACCGACAGTAGAAAT------------ATGCCTGTAAAGGAAGTTATTATTGTGGAAAGTGGTGAACTG
CYPB_YEAST/37-197 AAGGTGTTTTTCGATATTGAACATGGTGAAGAGAAAGTTGGCAGAATCGTTATTGGGTTGTACGGAAAGGTATGTCCTAAGACGGCGAAGAACTTCTACAAGTTAAGCaccACCACTAATTCCAAAAAGGGG......------------------TTCATCGGGTCCACTTTCCATAGGGTGATTCCCAACTTCATGGTACAGGGAGGGGACTTCACAGACGGCACTGGCGTTGGTGGCAAATCCATCTATGGAGATACT---..................---TTCCCTGACGAAAACTTTACTTTGAAGCATGATCGCAAGGGCAGACTATCGATGGCTAATCGTGGT...AAAGATACCAATGGATCTCAGTTCTTCATCACCACTACGgaaGAAGCGTCGTGGCTCGATGGA...............AAGCATGTGGTATTTGGACAGGTTGTG------GACGGCATGGATGTGGTGAACTACATACAGCACGTGTCCAGAGATGCGAATGAC------------AAACCTCTCGAGGCGGTCAAGATCGCAAAATGCGGT------
PPI_SYNP7/3-145 CAAGCCATTCTGGAAACCGAGAAAGGCACG---------------ATCCGCCTGCAATTTTTTGACAACGACGCGCCGAACACGGTTGCTAACTTTGTGAAGCTCTCG...CAAGATGGCTTC---------......------------------TACGATGGGCTGACCTTCCACCGCGTCATTCCTGGGTTTATGAGCCAGGGCGGC---TGCCCCCATGGGACTGGCACCGGCGGCCCCGGCTACAAAATCCCCTGT---..................---------------GAAATCAACGATAATCCCCACCTAGCCGGAACGCTGTCGATGGCCCATGCGGGT...CGGAATACGGGTGGCAGCCAGTTCTTTATCTGCCATGAG...CCCCAGCCCCATTTGGACGGC...............GTGCATACGACCTTTGGGCAGACCGAAGATGACGAGAGCCTGAAAGTAGTGCGATCGCTGCGC------------------AATGGC------------GATCGCATTCTCTCCGTCAAA---ATCGTGACCGATGCTGCC
PPIB_BACSU/3-143 ACAGGTTACTTTTTATTAGAAGACGGGAAC------------AAAATTGAATTTGAACTTTATCCTGAAGCTGCACCTGGAACTGTTGCAAACTTTGAAAAGCTTGCG...AACGAAGGCTTT---------......------------------TATGACGGGCTTACATTCCACCGAGTGATCCCTGGCTTCGTCAGCCAAGGCGGA---TGCCCGCACGGAACTGGTACAGGCGGTCCGGGATACACAATCAAATGT---..................---------GAAACAGAAGGCAACCCGCATACACATGAGGCGGGCGCACTTTCTATGGCACATGCCGGA...AAAGACACTGGCGGCAGCCAATTTTTCATCGTTCATGAG...CCACAGCCTCATTTGAACGGT...............GTTCACACTGTATTTGGTAAAGTAACA------AGCGGATTAGAATTCGCGAAAAACATGTCT------------------AATGGC------------GATGTCATGAAAGAAGTTCGT------------GTAGAAGGC
PPIA_ECOLI/30-189 CACGTATTGTTGACAACCTCAGCTGGTAAC---------------ATCGAACTGGAGCTGGATAAACAAAAAGCGCCAGTGTCTGTGCAAAACTTTGTCGATTATGTG...AACAGCGGTTTT---------......------------------TATAACAACACTACCTTTCACCGCGTCATTCCTGGCTTTATGATTCAGGGCGGCGGTTTCACCGAGCAGATG---------------------------------CAGcagaaaaaaccaaacccgCCAATCAAAAATGAAGCCGATAACGGCCTGCGCAACACGCGTGGCACCATCGCGATGGCACGTACCGCTgacAAAGACAGCGCCACCAGCCAGTTCTTTATCAACGTTGCC...GATAACGCCTTCCTTGACCATggtcagcgtgatttcGGTTACGCGGTATTTGGTAAAGTGGTG------AAAGGCATGGACGTTGCCGATAAGATTTCCCAGGTGCCGACTCATGACGTTGGTCCGTACCAGAATGTGCCGTCAAAACCGGTAGTTATCCTTTCCGCTAAAGTCCTG
PPIA_ACIAD/23-182 ATGGTTGAGATGAAAACCAATCTGGGAAAT---------------ATAGAAATTGAGCTTTACAACAATAAAGCACCGATCTCAGCGAAAAACTTTGAAAGCTATGTC...AAAAATAATTTC---------......------------------TACAATGGCACTATTTTTCATCGCGTCATTCCAAATTTCATGATTCAAGGAGGTGGTTTTGAAACCAATATG---------------------------------AAAgagaaggcgactgctgcaCCTATCAAAAATGAGGCGTCAAATGGCTTGGCAAATACTCGCGGCACATTGGCAATGGCAAGAACCAGTaatCCCGATTCAGCAACCAGCCAGTTTTTTATCAATGTTGCA...GATAACAACTTCTTAAATGCTtcacgtacagatgcaGGTTATGCAGTATTTGGCAAGGTAATT------AAAGGCATGGATGTCGTCGATAAAATTGCGAATGTACCTACAAGTACCTATGGTATGCATCAAAATGTACCTAAACAACCTGTGAAAATTATAAGTGTACAAATTAAG