EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00150 - Cellulase)
Cellulase (glycosyl hydrolase family 5)
(Pfam reference: accession no. PF00150)
(Interpro reference: accession no. IPR001547)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
67 sequences @ 513 aa
(ave. pairwise identity: 0.22)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 42.92)
nucleotides
(available for above)
63 sequences @ 1539 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 28.25)
amino acids, restricted set
(corresp. to available nt seqs)
63 sequences @ 513 aa
(ave. pairwise identity: 0.22)
New Hampshire format
(total tree length: 40.60)