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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00141 phylogeny
for restricted amino acid alignment


 
((((((((((((((((((((P93553_SPIOL/28-271,(PER18_ARATH/47-293,PER46_ARATH/45-290)),((((Q7X8H7_ORYSA/50-300,(PER41_ARATH/42-286,PER6_ARATH/38-286)),PER63_ARATH/48-292),(((((Q7XPY0_ORYSA/52-301,Q8H225_9POAL/40-262),PER16_ARATH/41-287),((Q9ZP15_TRIRP/44-294,Q40367_MEDSA/40-290),((Q948Z3_SOLTU/45-295,(Q8W5H7_ORYSA/41-287,Q8H2P0_ORYSA/48-294)),((Q84UA9_ARTAN/42-292,(PER51_ARATH/43-293,PER73_ARATH/43-293)),P93552_SPIOL/43-293)))),Q8W5H8_ORYSA/42-290),PER55_ARATH/48-294)),PER19_ARATH/58-309)),((((((Q94DM0_ORYSA/56-300,Q42853_HORVU/60-300),((Q94DM6_ORYSA/57-301,Q94DM2_ORYSA/52-296),Q94DM4_ORYSA/55-297)),(((PER12_ARATH/60-303,(((P93547_SPIOL/49-292,Q94IQ1_TOBAC/52-295),Q43854_PHAAN/57-300),Q43782_LINUS/51-294)),Q9XFI8_SOYBN/51-288),Q43032_PETCR/63-305)),((O04710_MAIZE/53-295,Q7XSV2_ORYSA/50-290),(Q7XSV1_ORYSA/62-294,((Q7XSU8_ORYSA/56-288,Q7XSU6_ORYSA/47-283),Q7XSU7_ORYSA/52-290)))),Q9FYS6_PINSY/60-306),(PER7_ARATH/67-306,((PER21_ARATH/46-291,Q9FT05_CICAR/48-292),(Q8H958_MARPO/49-293,PER29_ARATH/54-303))))),(((Q9SC55_PICAB/52-303,((((((Q84ZT5_ASPOF/42-284,PER52_ARATH/46-288),(Q8RVP7_GOSHI/41-284,((Q9FPP5_GOSHI/22-261,Q42904_LINUS/44-287),Q9XFL4_PHAVU/46-288))),((((Q9XGV6_GOSHI/40-280,O65029_LINUS/30-269),(P93548_SPIOL/44-287,P93550_SPIOL/30-273)),Q43416_CENCI/40-273),(((PER4_ARATH/37-279,((O49193_9LAMI/44-285,O49192_9LAMI/45-286),PERX_NICSY/45-286)),Q9SSZ8_SCUBA/46-288),((PER1_ARAHY/40-280,(((O22439_ORYSA/37-279,(Q43220_WHEAT/41-283,Q41577_WHEAT/39-279)),(Q43417_CENCI/38-277,(Q7XIX1_ORYSA/40-277,(O81524_AVESA/41-276,Q8LLM5_WHEAT/41-277)))),Q9ZTS7_MAIZE/47-283)),Q9SSZ7_SCUBA/42-282)))),((P93549_SPIOL/38-279,(PER1_LYCES/86-321,(PERN_IPOBA/76-312,(PERA_IPOBA/75-311,Q9SQ62_IPOBA/80-316)))),(Q40372_MEDTR/45-289,Q7XIW9_ORYSA/40-284))),PER11_ARATH/46-298),(((Q8RVP6_GOSHI/39-285,PER17_ARATH/39-285),PER20_ARATH/46-299),((((Q9LI45_ORYSA/47-295,Q8H285_ANACO/43-291),(Q9M4Z2_SPIOL/48-296,((Q7X766_ORYSA/56-307,Q8RYP0_ORYSA/48-297),(((Q9M4Z4_SPIOL/45-292,Q9MAX9_ASPOF/44-292),PER36_ARATH/49-297),PER72_ARATH/49-297)))),(PER49_ARATH/46-294,PER14_ARATH/51-299)),((Q94IQ0_TOBAC/44-293,(PER9_ARATH/61-310,Q40258_MERAN/42-290)),Q9LDY1_ORYSA/59-308))))),(((PERN_ARMRU/46-293,(Q43004_ORYSA/51-299,Q8S7Y2_ORYSA/45-290)),PER10_ARATH/64-314),(((Q8RVP3_GOSHI/46-295,((((Q93XK6_MEDSA/45-294,Q40366_MEDSA/46-295),Q40365_MEDSA/37-285),Q9XFL3_PHAVU/33-282),(Q42905_LINUS/45-295,Q8S3U4_FICCA/40-290))),(((((((O65773_CUCPE/34-278,Q39653_CUCSA/3-247),Q39652_CUCSA/40-285),(PER2_CUCSA/14-256,Q40559_CUCSA/41-286)),Q43055_POPKI/39-282),(PER58_ARATH/41-293,(Q7XHB3_ORYSA/49-299,Q8S5Y4_ORYSA/44-296))),((PER53_ARATH/48-297,Q9XFL6_PHAVU/46-296),Q9LEH3_IPOBA/41-291)),((Q43050_POPKI/42-293,Q40950_POPNI/42-293),Q43102_POPTR/46-296))),(PER23_ARATH/47-297,PER32_ARATH/47-298)))),((Q8S0H9_ORYSA/80-326,((((PER70_ARATH/50-291,(PER71_ARATH/51-292,PER62_ARATH/41-283)),((Q41325_STYHU/42-284,(PER2_ARAHY/48-290,Q9XFL5_PHAVU/13-254)),(Q8RVP4_GOSHI/45-288,(Q43499_LYCES/50-292,Q9XIV8_TOBAC/48-290)))),(PER25_ARATH/45-287,P93551_SPIOL/25-267)),((Q8RVP5_GOSHI/39-282,Q9XFI7_SOYBN/56-300),Q9LLP7_ORYSA/47-293))),((P93546_SPIOL/45-290,((PER60_ARATH/44-289,Q7XC08_ORYSA/61-305),(PER61_ARATH/53-299,PER26_ARATH/53-299))),((PER57_ARATH/40-277,PER28_ARATH/39-285),(PER44_ARATH/38-273,PER8_ARATH/38-273)))))),(((((Q8L3W2_ORYSA/46-290,Q8GVP1_ORYSA/42-299),((Q43158_SPIPO/41-292,(PER1_ORYSA/40-288,Q7XN76_ORYSA/43-289)),Q8L4Z9_ORYSA/62-309)),(Q8L4E6_ORYSA/45-289,Q8S130_ORYSA/50-297)),((Q94H66_ORYSA/55-312,(PER1_ARATH/42-286,(PER27_ARATH/42-284,PER56_ARATH/48-292))),(((PER3_ARATH/42-288,PER30_ARATH/45-291),(PER39_ARATH/41-289,Q9ZNZ5_SOYBN/66-313)),((Q07446_LYCES/40-290,Q07445_LYCES/43-292),O49940_SPIOL/35-285)))),((Q40487_TOBAC/49-296,PER24_ARATH/62-313),Q9LDL0_ORYSA/47-289))),(((Q9ZRG6_SOYBN/58-303,PER64_ARATH/39-284),PER66_ARATH/42-288),PER47_ARATH/42-278)),((((Q9SSZ9_SCUBA/37-285,Q9M4Z5_SPIOL/47-295),Q8LMR4_ORYSA/31-283),((Q8W2X2_ORYSA/49-303,Q8LMR7_ORYSA/27-275),(Q8W2X3_ORYSA/45-283,Q8LMR6_ORYSA/42-286))),((Q9AS12_ORYSA/42-289,Q9FEQ7_MAIZE/40-299),Q9FEQ9_MAIZE/28-280))),(Q9LGT9_ORYSA/38-257,Q9LGU0_ORYSA/50-300)),(Q8GVG7_ORYSA/52-304,(((((Q9FRD8_ORYSA/46-295,Q9FEQ8_MAIZE/51-297),Q9FRD5_ORYSA/49-295),Q8GVG0_ORYSA/40-285),Q9FRE1_ORYSA/41-287),Q8GVF7_ORYSA/58-308))),(((Q9FYP5_ORYSA/41-303,Q9FYP0_ORYSA/47-308),Q7XLT4_ORYSA/35-303),Q9FYP3_ORYSA/40-290)),Q8GY91_ARATH/105-304),(Q7XZP6_ARATH/88-293,Q7XSS2_ORYSA/102-302)),((((((CATA_MYCIT/412-746,(Q7UB88_SHIFL/401-726,((((Q87I38_VIBPA/403-724,Q8U714_AGRT5/404-723),(Q9ZGM4_LEGPN/400-721,Q55110_SYNSP/399-720)),(P73911_SYNY3/426-752,Q8E981_SHEON/404-728)),Q9S5S1_BACST/400-726))),(((Q939D2_BURPS/413-748,(Q87C18_XYLFT/423-757,Q8PMX4_XANAC/421-756)),((Q87WL6_PSESM/421-756,Q88GQ0_PSEPK/421-751),(((CAT2_NEUCR/413-742,Q96VT4_EMENI/392-727),(Q8NJN2_PENMA/404-738,Q7Z7W6_ASPFU/417-750)),Q8X1N3_BLUGR/458-787))),(Q7NGW6_GLOVI/398-734,((Q92XG8_RHIME/392-727,(CATA_CAUCR/402-736,Q89WB4_BRAJA/445-778)),Q987S0_RHILO/420-755)))),((CATA_MYCSM/412-739,Q9R2E9_MYCVN/407-734),(CATA_LEGPN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