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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00141 phylogeny
for amino acid alignment


 
(((((((((((((((((((((Q7X8H7_ORYSA/50-300,(PER41_ARATH/42-286,PER6_ARATH/38-286)),PER63_ARATH/48-292),(((((Q7XPY0_ORYSA/52-301,Q8H225_9POAL/40-262),PER16_ARATH/41-287),((Q9ZP15_TRIRP/44-294,Q40367_MEDSA/40-290),((Q948Z3_SOLTU/45-295,(Q8W5H7_ORYSA/41-287,Q8H2P0_ORYSA/48-294)),((Q84UA9_ARTAN/42-292,(PER51_ARATH/43-293,PER73_ARATH/43-293)),P93552_SPIOL/43-293)))),Q8W5H8_ORYSA/42-290),PER55_ARATH/48-294)),PER19_ARATH/58-309),((P93553_SPIOL/28-271,(PER18_ARATH/47-293,PER46_ARATH/45-290)),PER7_ARATH/67-306)),(((Q9ZRG6_SOYBN/58-303,PER64_ARATH/39-284),PER66_ARATH/42-288),PER47_ARATH/42-278)),((((((Q8L3W2_ORYSA/46-290,Q8GVP1_ORYSA/42-299),((Q43158_SPIPO/41-292,(PER1_ORYSA/40-288,Q7XN76_ORYSA/43-289)),Q8L4Z9_ORYSA/62-309)),(Q8L4E6_ORYSA/45-289,Q8S130_ORYSA/50-297)),((Q94H66_ORYSA/55-312,(PER1_ARATH/42-286,(PER27_ARATH/42-284,PER56_ARATH/48-292))),(((PER3_ARATH/42-288,PER30_ARATH/45-291),(PER39_ARATH/41-289,Q9ZNZ5_SOYBN/66-313)),((Q07446_LYCES/40-290,Q07445_LYCES/43-292),O49940_SPIOL/35-285)))),((Q40487_TOBAC/49-296,PER24_ARATH/62-313),Q9LDL0_ORYSA/47-289)),((((PER21_ARATH/46-291,Q9FT05_CICAR/48-292),(Q8H958_MARPO/49-293,PER29_ARATH/54-303)),((((((PER70_ARATH/50-291,(PER71_ARATH/51-292,PER62_ARATH/41-283)),((Q41325_STYHU/42-284,(PER2_ARAHY/48-290,Q9XFL5_PHAVU/13-254)),(Q8RVP4_GOSHI/45-288,(Q43499_LYCES/50-292,Q9XIV8_TOBAC/48-290)))),(PER25_ARATH/45-287,P93551_SPIOL/25-267)),((PER13_ARATH/40-279,((Q9XFI7_SOYBN/56-300,PER43_ARATH/42-285),Q8RVP5_GOSHI/39-282)),Q9LLP7_ORYSA/47-293)),(PER48_ARATH/30-277,Q8S0H9_ORYSA/80-326)),((P93546_SPIOL/45-290,((PER57_ARATH/40-277,PER28_ARATH/39-285),(PER44_ARATH/38-273,PER8_ARATH/38-273))),((PER60_ARATH/44-289,Q7XC08_ORYSA/61-305),(PER61_ARATH/53-299,PER26_ARATH/53-299))))),((((Q9SC55_PICAB/52-303,(((PER20_ARATH/46-299,((Q94IQ0_TOBAC/44-293,(PER9_ARATH/61-310,Q40258_MERAN/42-290)),Q9LDY1_ORYSA/59-308)),(((Q9LI45_ORYSA/47-295,Q8H285_ANACO/43-291),(Q9M4Z2_SPIOL/48-296,((Q7X766_ORYSA/56-307,Q8RYP0_ORYSA/48-297),(((Q9M4Z4_SPIOL/45-292,Q9MAX9_ASPOF/44-292),PER36_ARATH/49-297),PER72_ARATH/49-297)))),(PER49_ARATH/46-294,PER14_ARATH/51-299))),((P93549_SPIOL/38-279,(Q40372_MEDTR/45-289,Q7XIW9_ORYSA/40-284)),(((((Q84ZT6_ASPOF/23-265,Q84ZT5_ASPOF/42-284),(Q8RVP7_GOSHI/41-284,((Q9FPP5_GOSHI/22-261,Q42904_LINUS/44-287),Q9XFL4_PHAVU/46-288))),PER52_ARATH/46-288),((((Q9XGV6_GOSHI/40-280,(P93548_SPIOL/44-287,P93550_SPIOL/30-273)),O65029_LINUS/30-269),Q43416_CENCI/40-273),((((O49193_9LAMI/44-285,O49192_9LAMI/45-286),((PER5_ARATH/42-285,PER4_ARATH/37-279),PERX_NICSY/45-286)),Q9SSZ8_SCUBA/46-288),((PER1_ARAHY/40-280,Q9SSZ7_SCUBA/42-282),(((Q7XIX1_ORYSA/40-277,(O81524_AVESA/41-276,Q8LLM5_WHEAT/41-277)),((Q43220_WHEAT/41-283,Q41577_WHEAT/39-279),(O22439_ORYSA/37-279,Q43417_CENCI/38-277))),Q9ZTS7_MAIZE/47-283))))),(PER1_LYCES/86-321,(PERN_IPOBA/76-312,(PERA_IPOBA/75-311,Q9SQ62_IPOBA/80-316))))))),((Q8RVP6_GOSHI/39-285,PER17_ARATH/39-285),(PER11_ARATH/46-298,PER40_ARATH/66-314))),(((PERN_ARMRU/46-293,(Q43004_ORYSA/51-299,(Q8S7Y2_ORYSA/45-290,Q9ZTS8_MAIZE/45-217))),PER10_ARATH/64-314),((((PER53_ARATH/48-297,Q9XFL6_PHAVU/46-296),Q9LEH3_IPOBA/41-291),(((PER58_ARATH/41-293,Q43055_POPKI/39-282),(((O65773_CUCPE/34-278,Q39653_CUCSA/3-247),Q39652_CUCSA/40-285),(PER2_CUCSA/14-256,Q40559_CUCSA/41-286))),(((Q43050_POPKI/42-293,Q40950_POPNI/42-293),Q43102_POPTR/46-296),(Q8RVP3_GOSHI/46-295,((Q42905_LINUS/45-295,Q8S3U4_FICCA/40-290),((((Q93XK6_MEDSA/45-294,Q40366_MEDSA/46-295),Q40365_MEDSA/37-285),Q9XFL3_PHAVU/33-282),(PER23_ARATH/47-297,PER32_ARATH/47-298))))))),(Q7XHB3_ORYSA/49-299,Q8S5Y4_ORYSA/44-296)))),(((((Q94DM0_ORYSA/56-300,Q42853_HORVU/60-300),((Q94DM6_ORYSA/57-301,Q94DM2_ORYSA/52-296),Q94DM4_ORYSA/55-297)),(((PER12_ARATH/60-303,(((P93547_SPIOL/49-292,Q94IQ1_TOBAC/52-295),Q43854_PHAAN/57-300),Q43782_LINUS/51-294)),Q9XFI8_SOYBN/51-288),Q43032_PETCR/63-305)),((O04710_MAIZE/53-295,Q7XSV2_ORYSA/50-290),(Q7XSV1_ORYSA/62-294,((Q7XSU8_ORYSA/56-288,Q7XSU6_ORYSA/47-283),Q7XSU7_ORYSA/52-290)))),Q9FYS6_PINSY/60-306))))),((((Q9SSZ9_SCUBA/37-285,Q9M4Z5_SPIOL/47-295),Q8LMR4_ORYSA/31-283),((Q8W2X2_ORYSA/49-303,Q8LMR7_ORYSA/27-275),(Q8W2X3_ORYSA/45-283,Q8LMR6_ORYSA/42-286))),((Q9AS12_ORYSA/42-289,Q9FEQ7_MAIZE/40-299),Q9FEQ9_MAIZE/28-280))),(Q9LGT9_ORYSA/38-257,Q9LGU0_ORYSA/50-300)),(Q8GVG7_ORYSA/52-304,(((((Q9FRD8_ORYSA/46-295,Q9FEQ8_MAIZE/51-297),Q9FRD5_ORYSA/49-295),Q8GVG0_ORYSA/40-285),Q9FRE1_ORYSA/41-287),Q8GVF7_ORYSA/58-308))),(((Q9FYP5_ORYSA/41-303,Q9FYP0_ORYSA/47-308),Q7XLT4_ORYSA/35-303),Q9FYP3_ORYSA/40-290)),Q8GY91_ARATH/105-304),(Q7XZP6_ARATH/88-293,Q7XSS2_ORYSA/102-302)),(Q7Y1X0_PORYE/9-219,(((Q8GT26_9RHOD/12-223,(Q9SXL5_CHLSW/51-296,O49822_CHLRE/39-296)),((((O23983_HORVU/19-227,(Q8GZP1_HEVBR/19-227,Q9SED0_PIMBR/23-227)),APX1_ARATH/18-226),Q8GU36_PHYPA/19-227),((O65634_ARATH/16-222,(O81603_MESCR/17-221,((Q42909_MESCR/13-219,O81604_MESCR/18-224),Q41371_SPIOL/18-219))),Q948P1_9ROSI/17-224))),(((Q7SDV9_NEUCR/90-322,CCPR_YEAST/89-321),(((Q7NGW6_GLOVI/66-393,((Q9S5L5_BACST/69-395,((((CATA_HALMA/63-390,CATA_HALN1/51-380),(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