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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00136 phylogeny
for restricted amino acid alignment


 
((((Q9QEL0_9ALPH/621-1171,DPOL_HHV21/617-1200),(Q89604_9ALPH/639-1203,((O93043_FHV1/606-1159,DPOL_EHV1B/611-1173),Q69390_9ALPH/516-1008))),DPOL_VZVD/597-1136),((((Q9Q6Z6_9GAMA/520-997,O36363_9GAMA/550-1026),(DPOL_SHV21/522-994,((O41930_MHV68/528-1001,O40910_HHV8/533-1006),DPOL_EHV2/530-1004))),DPOL_EBV/532-1013),(((((DPOL_RHCM6/533-1017,DPOL_TUHV2/556-1135),(DPOL_RCMVM/533-1077,DPOL_MCMVS/543-1050)),DPOL_GPCMV/556-1073),(O92827_9BETA/515-999,Q9WT26_9BETA/517-998)),((((DPOD_SOYBN/511-969,((DPOD_MESAU/546-1005,(DPOD_DROME/534-994,DPOD_CAEEL/520-978)),((DPOD_CANAL/484-939,DPOD_YEAST/555-1006),DPOD_SCHPO/534-990))),DPOD_PLAFK/544-1000),(O36638_9PHYC/422-974,DPOL_CHVN2/432-881)),((((DPOL_RSIV/397-938,Q9QSK2_IRV6/578-1226),Q86992_9VIRU/492-1090),(((((((DPOA_SCHPO/773-1222,DPOA_YEAST/792-1248),DPOA_ORYSA/538-1012),(DPOA_OXYNO/783-1270,DPOA_OXYTR/809-1299)),DPOA_TRYBB/684-1157),(DPOA_DROME/805-1258,DPOA_HUMAN/783-1246)),((((DPOL_ARCFU/361-774,(DPO2_AERPE/371-774,Q59691_PYROC/388-793)),DPOL_METVO/393-818),(((DPOL_BPT4/383-855,DPOL_BPR69/386-859),((Q59690_PYROC/488-905,DPO1_AERPE/535-951),((DPO1_SULAC/447-866,DPO1_SULOH/448-867),DPO1_SULSO/450-869))),O74046_CERSY/420-835)),(DPO2_ECOLI/369-782,DPOL_ASFL6/457-978))),(((DPOL_NPVLD/443-936,(Q82482_9NUCL/441-938,(DPOL_NPVOP/425-914,DPOL_NPVBM/428-919))),P89285_GVXN/458-940),(((((DPOL_ORFN2/499-998,Q98207_MCV1/494-994),(DPOL_VACCA/497-995,Q9Q8R2_9POXV/498-996)),DPOL_FOWPV/483-977),Q9YW56_MSEPV/569-1067),Q9YQZ6_9HERP/602-1028)))),((DPOZ_YEAST/919-1384,Q9GSR1_DROME/1550-2010),Q9U0U7_LEIMA/2240-2731))))),Q9WSY3_9ALPH/582-1139);
((((Q9QEL0_9ALPH/621-1171:0.10819,DPOL_HHV21/617-1200:0.11114):0.15229,(Q89604_9ALPH/639-1203:0.20275,((O93043_FHV1/606-1159:0.18000,DPOL_EHV1B/611-1173:0.12571):0.07464,Q69390_9ALPH/516-1008:0.18694):0.03813):0.04147):0.04800,DPOL_VZVD/597-1136:0.28529):0.08885,((((Q9Q6Z6_9GAMA/520-997:0.21902,O36363_9GAMA/550-1026:0.21187):0.08441,(DPOL_SHV21/522-994:0.21647,((O41930_MHV68/528-1001:0.29314,O40910_HHV8/533-1006:0.20943):0.08295,DPOL_EHV2/530-1004:0.27676):0.05739):0.06111):0.08632,DPOL_EBV/532-1013:0.25635):0.32609,(((((DPOL_RHCM6/533-1017:0.29574,DPOL_TUHV2/556-1135:0.26975):0.10682,(DPOL_RCMVM/533-1077:0.16846,DPOL_MCMVS/543-1050:0.20677):0.17610):0.06570,DPOL_GPCMV/556-1073:0.30487):0.14243,(O92827_9BETA/515-999:0.21538,Q9WT26_9BETA/517-998:0.17955):0.25447):0.18193,((((DPOD_SOYBN/511-969:0.19368,((DPOD_MESAU/546-1005:0.22448,(DPOD_DROME/534-994:0.14835,DPOD_CAEEL/520-978:0.31384):0.07424):0.08535,((DPOD_CANAL/484-939:0.15496,DPOD_YEAST/555-1006:0.31697):0.06315,DPOD_SCHPO/534-990:0.18272):0.08682):0.11227):0.12868,DPOD_PLAFK/544-1000:0.36579):0.23166,(O36638_9PHYC/422-974:0.93742,DPOL_CHVN2/432-881:0.73309):0.18924):0.08916,((((DPOL_RSIV/397-938:0.86981,Q9QSK2_IRV6/578-1226:0.85144):0.23422,Q86992_9VIRU/492-1090:0.99028):0.40813,(((((((DPOA_SCHPO/773-1222:0.26117,DPOA_YEAST/792-1248:0.38978):0.17317,DPOA_ORYSA/538-1012:0.41995):0.09021,(DPOA_OXYNO/783-1270:0.12699,DPOA_OXYTR/809-1299:0.07814):0.36565):0.17657,DPOA_TRYBB/684-1157:0.62736):0.06610,(DPOA_DROME/805-1258:0.34121,DPOA_HUMAN/783-1246:0.25476):0.13421):0.42048,((((DPOL_ARCFU/361-774:0.41453,(DPO2_AERPE/371-774:0.25793,Q59691_PYROC/388-793:0.21943):0.23744):0.19044,DPOL_METVO/393-818:0.65149):0.05445,(((DPOL_BPT4/383-855:0.28189,DPOL_BPR69/386-859:0.27118):2.76169,((Q59690_PYROC/488-905:0.23409,DPO1_AERPE/535-951:0.43233):0.06454,((DPO1_SULAC/447-866:0.14183,DPO1_SULOH/448-867:0.12909):0.03692,DPO1_SULSO/450-869:0.19112):0.20671):0.00000):0.19963,O74046_CERSY/420-835:0.48263):0.76888):0.30871,(DPO2_ECOLI/369-782:1.14083,DPOL_ASFL6/457-978:1.52616):0.10368):0.14248):0.14983,(((DPOL_NPVLD/443-936:0.37886,(Q82482_9NUCL/441-938:0.33367,(DPOL_NPVOP/425-914:0.19114,DPOL_NPVBM/428-919:0.19252):0.39029):0.06882):0.14841,P89285_GVXN/458-940:0.75586):1.13111,(((((DPOL_ORFN2/499-998:0.29021,Q98207_MCV1/494-994:0.31709):0.07284,(DPOL_VACCA/497-995:0.15146,Q9Q8R2_9POXV/498-996:0.16752):0.11381):0.16993,DPOL_FOWPV/483-977:0.29302):0.60057,Q9YW56_MSEPV/569-1067:1.09620):0.20029,Q9YQZ6_9HERP/602-1028:2.11747):0.33814):0.29566):0.25351):0.05223,((DPOZ_YEAST/919-1384:0.46456,Q9GSR1_DROME/1550-2010:0.34892):0.15701,Q9U0U7_LEIMA/2240-2731:0.61861):0.67732):0.03908):0.45637):0.16587):0.35951,Q9WSY3_9ALPH/582-1139:0.22123);